Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.61■■□□□ 1.21
SHC3Q92529 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.61■■□□□ 1.21
SHC3Q92529 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.61■■□□□ 1.21
SHC3Q92529 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.61■■□□□ 1.21
SHC3Q92529 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.61■■□□□ 1.21
SHC3Q92529 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.61■■□□□ 1.21
SHC3Q92529 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC3Q92529 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC3Q92529 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC3Q92529 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SHC3Q92529 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 EEF1DP3-203ENST00000566025 782 ntBASIC22.6■■□□□ 1.21
SHC3Q92529 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC3Q92529 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC3Q92529 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SHC3Q92529 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC3Q92529 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC3Q92529 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SHC3Q92529 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.59■■□□□ 1.21
SHC3Q92529 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.59■■□□□ 1.21
SHC3Q92529 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC3Q92529 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SHC3Q92529 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.59■■□□□ 1.21
SHC3Q92529 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.59■■□□□ 1.21
SHC3Q92529 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC3Q92529 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC3Q92529 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC3Q92529 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC3Q92529 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC3Q92529 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.58■■□□□ 1.21
SHC3Q92529 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.58■■□□□ 1.21
SHC3Q92529 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.58■■□□□ 1.21
SHC3Q92529 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHC3Q92529 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHC3Q92529 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHC3Q92529 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.58■■□□□ 1.21
SHC3Q92529 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SHC3Q92529 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
SHC3Q92529 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SHC3Q92529 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.58■■□□□ 1.21
SHC3Q92529 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SHC3Q92529 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.58■■□□□ 1.21
SHC3Q92529 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
SHC3Q92529 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SHC3Q92529 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SHC3Q92529 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHC3Q92529 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHC3Q92529 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.58■■□□□ 1.2
SHC3Q92529 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHC3Q92529 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHC3Q92529 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.57■■□□□ 1.2
SHC3Q92529 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SHC3Q92529 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHC3Q92529 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.57■■□□□ 1.2
SHC3Q92529 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHC3Q92529 ZNRF2P3-201ENST00000424200 374 ntBASIC22.57■■□□□ 1.2
SHC3Q92529 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHC3Q92529 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.57■■□□□ 1.2
SHC3Q92529 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.57■■□□□ 1.2
SHC3Q92529 AC053503.5-201ENST00000601508 636 ntBASIC22.57■■□□□ 1.2
SHC3Q92529 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.57■■□□□ 1.2
SHC3Q92529 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.57■■□□□ 1.2
SHC3Q92529 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.57■■□□□ 1.2
SHC3Q92529 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHC3Q92529 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.56■■□□□ 1.2
SHC3Q92529 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC3Q92529 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.56■■□□□ 1.2
SHC3Q92529 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SHC3Q92529 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.56■■□□□ 1.2
SHC3Q92529 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC3Q92529 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SHC3Q92529 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC3Q92529 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHC3Q92529 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC3Q92529 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC3Q92529 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHC3Q92529 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHC3Q92529 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC3Q92529 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.55■■□□□ 1.2
SHC3Q92529 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SHC3Q92529 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.55■■□□□ 1.2
SHC3Q92529 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC3Q92529 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SHC3Q92529 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC3Q92529 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHC3Q92529 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms