Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 TECR-216ENST00000598987 1202 ntTSL 215.48■□□□□ 0.072e-7■■■■□ 19.4
SND1Q7KZF4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.48■□□□□ 0.072e-7■■■■□ 19.4
SND1Q7KZF4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.48■□□□□ 0.072e-7■■■■□ 19.4
SND1Q7KZF4 TECR-222ENST00000601187 559 ntTSL 315.48■□□□□ 0.072e-7■■■■□ 19.4
SND1Q7KZF4 TECR-203ENST00000593775 720 ntTSL 213.05□□□□□ -0.325e-8■■■■□ 19.4
SND1Q7KZF4 TECR-217ENST00000599101 584 ntTSL 210.47□□□□□ -0.735e-8■■■■□ 19.4
SND1Q7KZF4 CLSTN3-215ENST00000544584 546 ntTSL 45.87□□□□□ -1.476e-7■■■■□ 19.4
SND1Q7KZF4 GSTO1-206ENST00000493946 874 ntTSL 213.16□□□□□ -0.31e-8■■■■□ 19.4
SND1Q7KZF4 TF-211ENST00000485977 580 ntTSL 319.57■□□□□ 0.725e-20■■■■□ 19.4
SND1Q7KZF4 CLN3-254ENST00000637050 1684 ntTSL 519.14■□□□□ 0.661e-8■■■■□ 19.4
SND1Q7KZF4 CLN3-252ENST00000636907 1679 ntTSL 217.56■□□□□ 0.41e-8■■■■□ 19.4
SND1Q7KZF4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.2■■□□□ 1.944e-7■■■■□ 19.3
SND1Q7KZF4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.014e-7■■■■□ 19.3
SND1Q7KZF4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.014e-7■■■■□ 19.3
SND1Q7KZF4 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.144e-7■■■■□ 19.3
SND1Q7KZF4 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC14.01□□□□□ -0.174e-7■■■■□ 19.3
SND1Q7KZF4 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC13.39□□□□□ -0.274e-7■■■■□ 19.3
SND1Q7KZF4 SERPING1-212ENST00000531797 907 ntTSL 1 (best)9.93□□□□□ -0.824e-7■■■■□ 19.3
SND1Q7KZF4 SERPING1-210ENST00000531133 1004 ntTSL 1 (best)9.23□□□□□ -0.934e-7■■■■□ 19.3
SND1Q7KZF4 LTBP4-223ENST00000598717 811 ntTSL 520.12■□□□□ 0.812e-9■■■■□ 19.3
SND1Q7KZF4 LTBP4-222ENST00000598256 752 ntTSL 216.58■□□□□ 0.242e-9■■■■□ 19.3
SND1Q7KZF4 POFUT2-212ENST00000493811 577 ntTSL 315.06■□□□□ 02e-9■■■■□ 19.3
SND1Q7KZF4 LTBP4-219ENST00000598055 568 ntTSL 413.71□□□□□ -0.212e-9■■■■□ 19.3
SND1Q7KZF4 SURF4-201ENST00000371982 553 ntTSL 315.36■□□□□ 0.053e-15■■■■□ 19.3
SND1Q7KZF4 KRT8-206ENST00000546900 523 ntTSL 320.57■□□□□ 0.889e-7■■■■□ 19.3
SND1Q7KZF4 SEMA7A-204ENST00000567345 674 ntTSL 420.22■□□□□ 0.837e-7■■■■□ 19.3
SND1Q7KZF4 KRT8-210ENST00000548998 918 ntTSL 518.88■□□□□ 0.619e-7■■■■□ 19.3
SND1Q7KZF4 KRT8-204ENST00000546826 1165 ntTSL 517.98■□□□□ 0.479e-7■■■■□ 19.3
SND1Q7KZF4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.33■□□□□ 0.361e-7■■■■□ 19.3
SND1Q7KZF4 PCYOX1-204ENST00000433351 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.361e-7■■■■□ 19.3
SND1Q7KZF4 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.37□□□□□ -0.271e-23■■■■□ 19.3
SND1Q7KZF4 PRKCSH-208ENST00000589126 625 ntTSL 513.92□□□□□ -0.183e-10■■■■□ 19.3
SND1Q7KZF4 GALNT2-204ENST00000492568 2766 ntTSL 212.51□□□□□ -0.418e-7■■■■□ 19.3
SND1Q7KZF4 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.482e-7■■■■□ 19.3
SND1Q7KZF4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.49□□□□□ -1.052e-7■■■■□ 19.3
SND1Q7KZF4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.882e-6■■■■□ 19.3
SND1Q7KZF4 CD82-214ENST00000532544 580 ntTSL 318.27■□□□□ 0.524e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-212ENST00000575400 858 ntTSL 317.43■□□□□ 0.382e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.262e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.082e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.052e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-203ENST00000570492 766 ntTSL 314.68□□□□□ -0.062e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-216ENST00000576965 599 ntTSL 514.46□□□□□ -0.092e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-206ENST00000572382 989 ntTSL 214.3□□□□□ -0.122e-6■■■■□ 19.3
SND1Q7KZF4 CD82-208ENST00000526958 538 ntTSL 413.92□□□□□ -0.184e-6■■■■□ 19.3
SND1Q7KZF4 CD82-206ENST00000525813 573 ntTSL 413.06□□□□□ -0.324e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.372e-6■■■■□ 19.3
SND1Q7KZF4 CD82-209ENST00000527737 654 ntTSL 312.36□□□□□ -0.434e-6■■■■□ 19.3
SND1Q7KZF4 RNF167-213ENST00000575524 619 ntTSL 212.3□□□□□ -0.442e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.742e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.512e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.32e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.182e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.4■□□□□ 0.222e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-203ENST00000557794 1196 ntTSL 511.75□□□□□ -0.532e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-207ENST00000558951 543 ntTSL 39.74□□□□□ -0.852e-6■■■■□ 19.3
SND1Q7KZF4 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)9.64□□□□□ -0.872e-6■■■■□ 19.3
SND1Q7KZF4 HSPG2-202ENST00000374676 411 ntTSL 311.82□□□□□ -0.525e-9■■■■□ 19.3
SND1Q7KZF4 SLC37A4-211ENST00000529510 850 ntTSL 517.92■□□□□ 0.464e-8■■■■□ 19.3
SND1Q7KZF4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.372e-6■■■■□ 19.3
SND1Q7KZF4 ITGB1-214ENST00000488427 861 ntTSL 1 (best)7.76□□□□□ -1.179e-11■■■■□ 19.3
SND1Q7KZF4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.24■□□□□ 0.678e-10■■■■□ 19.3
SND1Q7KZF4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.17■□□□□ 0.662e-9■■■■□ 19.3
SND1Q7KZF4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.512e-9■■■■□ 19.3
SND1Q7KZF4 MFGE8-205ENST00000558018 1989 ntTSL 218■□□□□ 0.472e-9■■■■□ 19.3
SND1Q7KZF4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.372e-9■■■■□ 19.3
SND1Q7KZF4 TMED9-203ENST00000507578 144 ntTSL 52.91□□□□□ -1.942e-14■■■■□ 19.3
SND1Q7KZF4 CTSB-203ENST00000420692 2230 ntTSL 217.59■□□□□ 0.418e-15■■■□□ 19.2
SND1Q7KZF4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.224e-8■■■□□ 19.2
SND1Q7KZF4 MRPL16-204ENST00000534340 574 ntTSL 38.74□□□□□ -1.014e-8■■■□□ 19.2
SND1Q7KZF4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.56■□□□□ 0.562e-8■■■□□ 19.2
SND1Q7KZF4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.272e-8■■■□□ 19.2
SND1Q7KZF4 INSIG1-206ENST00000476756 1320 ntTSL 211.74□□□□□ -0.532e-8■■■□□ 19.2
SND1Q7KZF4 TOR1AIP1-203ENST00000447964 888 ntTSL 39.44□□□□□ -0.96e-8■■■□□ 19.2
SND1Q7KZF4 PSMA4-208ENST00000558639 733 ntTSL 310.32□□□□□ -0.768e-9■■■□□ 19.2
SND1Q7KZF4 REEP5-203ENST00000474542 650 ntTSL 417.56■□□□□ 0.48e-12■■■□□ 19.2
SND1Q7KZF4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.98□□□□□ -0.178e-12■■■□□ 19.2
SND1Q7KZF4 RETSAT-207ENST00000490291 660 ntTSL 213.92□□□□□ -0.187e-10■■■□□ 19.2
SND1Q7KZF4 CTSB-227ENST00000533110 399 ntTSL 59.61□□□□□ -0.871e-27■■■□□ 19.2
SND1Q7KZF4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.023e-6■■■□□ 19.2
SND1Q7KZF4 CD82-210ENST00000529277 582 ntTSL 517.96■□□□□ 0.473e-6■■■□□ 19.2
SND1Q7KZF4 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.23■□□□□ 0.353e-6■■■□□ 19.2
SND1Q7KZF4 CD82-207ENST00000525898 1405 ntTSL 516.39■□□□□ 0.213e-6■■■□□ 19.2
SND1Q7KZF4 CD82-212ENST00000530601 581 ntTSL 315.85■□□□□ 0.133e-6■■■□□ 19.2
SND1Q7KZF4 CD82-213ENST00000530931 891 ntTSL 315.63■□□□□ 0.093e-6■■■□□ 19.2
SND1Q7KZF4 ATRAID-203ENST00000419744 612 ntTSL 28.21□□□□□ -1.11e-7■■■□□ 19.2
SND1Q7KZF4 ATRAID-206ENST00000491220 198 ntTSL 22.87□□□□□ -1.951e-7■■■□□ 19.2
SND1Q7KZF4 ABCB1-205ENST00000482527 555 ntTSL 410.67□□□□□ -0.71e-6■■■□□ 19.2
SND1Q7KZF4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.141e-10■■■□□ 19.2
SND1Q7KZF4 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.421e-10■■■□□ 19.2
SND1Q7KZF4 CFH-205ENST00000496761 550 ntTSL 27.01□□□□□ -1.291e-8■■■□□ 19.2
SND1Q7KZF4 OS9-223ENST00000553208 1022 ntTSL 313.02□□□□□ -0.333e-8■■■□□ 19.2
SND1Q7KZF4 SLC13A5-204ENST00000570687 419 ntTSL 35.79□□□□□ -1.481e-43■■■□□ 19.2
SND1Q7KZF4 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC10.04□□□□□ -0.82e-6■■■□□ 19.2
SND1Q7KZF4 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.892e-6■■■□□ 19.2
SND1Q7KZF4 SSR4-207ENST00000471724 443 ntTSL 314.64□□□□□ -0.072e-14■■■□□ 19.1
SND1Q7KZF4 LGMN-212ENST00000556097 1054 ntTSL 515.78■□□□□ 0.121e-6■■■□□ 19.1
SND1Q7KZF4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.132e-6■■■□□ 19.1
SND1Q7KZF4 TSPAN9-205ENST00000492305 692 ntTSL 512.36□□□□□ -0.431e-9■■■□□ 19.1
SND1Q7KZF4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.192e-7■■■□□ 19.1
Retrieved 100 of 13,567 protein–RNA pairs in 124.6 ms