RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 NISCHQ9Y2I1 1504 aa37.56■■■■□ 3.6
LTBP4-222ENST00000598256 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
LTBP4-222ENST00000598256 ABCC9O60706 1549 aa32.52■■■□□ 2.8
LTBP4-222ENST00000598256 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.62
LTBP4-222ENST00000598256 DNAJC5BQ9UF47 199 aa31.16■■■□□ 2.58
LTBP4-222ENST00000598256 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
LTBP4-222ENST00000598256 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
LTBP4-222ENST00000598256 NACADO15069 1562 aa31.04■■■□□ 2.56
LTBP4-222ENST00000598256 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
LTBP4-222ENST00000598256 RB1CC1Q8TDY2 1594 aa30.96■■■□□ 2.55
LTBP4-222ENST00000598256 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
LTBP4-222ENST00000598256 SCRIBQ14160 1630 aa30.39■■■□□ 2.46
LTBP4-222ENST00000598256 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
LTBP4-222ENST00000598256 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
LTBP4-222ENST00000598256 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
LTBP4-222ENST00000598256 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
LTBP4-222ENST00000598256 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
LTBP4-222ENST00000598256 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
LTBP4-222ENST00000598256 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
LTBP4-222ENST00000598256 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
LTBP4-222ENST00000598256 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
LTBP4-222ENST00000598256 DNAJC5Q9H3Z4 198 aa28.95■■■□□ 2.22
LTBP4-222ENST00000598256 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
LTBP4-222ENST00000598256 WIZO95785 1651 aa28.78■■■□□ 2.2
LTBP4-222ENST00000598256 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
LTBP4-222ENST00000598256 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
LTBP4-222ENST00000598256 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
LTBP4-222ENST00000598256 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
LTBP4-222ENST00000598256 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
LTBP4-222ENST00000598256 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
LTBP4-222ENST00000598256 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
LTBP4-222ENST00000598256 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
LTBP4-222ENST00000598256 CUX2O14529 1486 aa28.22■■■□□ 2.11
LTBP4-222ENST00000598256 CCDC88BA6NC98 1476 aa28.05■■■□□ 2.08
LTBP4-222ENST00000598256 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
LTBP4-222ENST00000598256 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
LTBP4-222ENST00000598256 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
LTBP4-222ENST00000598256 NESP48681 1621 aa27.81■■■□□ 2.04
LTBP4-222ENST00000598256 CADPSQ9ULU8 1353 aa27.74■■■□□ 2.03
LTBP4-222ENST00000598256 CFTRP13569 1480 aa27.73■■■□□ 2.03
LTBP4-222ENST00000598256 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
LTBP4-222ENST00000598256 THOC2Q8NI27 1593 aaKnown RBP27.58■■■□□ 2.01
LTBP4-222ENST00000598256 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
LTBP4-222ENST00000598256 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
LTBP4-222ENST00000598256 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
LTBP4-222ENST00000598256 TRIM41Q8WV44 630 aa27.39■■□□□ 1.98
LTBP4-222ENST00000598256 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
LTBP4-222ENST00000598256 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
LTBP4-222ENST00000598256 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
LTBP4-222ENST00000598256 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
LTBP4-222ENST00000598256 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
LTBP4-222ENST00000598256 WDR62O43379 1518 aa27.16■■□□□ 1.94
LTBP4-222ENST00000598256 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
LTBP4-222ENST00000598256 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
LTBP4-222ENST00000598256 CUX1P39880 1505 aa27.16■■□□□ 1.94
LTBP4-222ENST00000598256 TOPBP1Q92547 1522 aa27.14■■□□□ 1.94
LTBP4-222ENST00000598256 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
LTBP4-222ENST00000598256 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
LTBP4-222ENST00000598256 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
LTBP4-222ENST00000598256 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
LTBP4-222ENST00000598256 OSCARQ8IYS5 282 aa26.88■■□□□ 1.89
LTBP4-222ENST00000598256 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
LTBP4-222ENST00000598256 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
LTBP4-222ENST00000598256 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
LTBP4-222ENST00000598256 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
LTBP4-222ENST00000598256 SOGA1O94964 1423 aa26.79■■□□□ 1.88
LTBP4-222ENST00000598256 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
LTBP4-222ENST00000598256 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
LTBP4-222ENST00000598256 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
LTBP4-222ENST00000598256 PBRM1Q86U86 1689 aa26.62■■□□□ 1.85
LTBP4-222ENST00000598256 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
LTBP4-222ENST00000598256 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
LTBP4-222ENST00000598256 RIMBP3CA6NJZ7 1639 aa26.56■■□□□ 1.84
LTBP4-222ENST00000598256 RIMBP3BA6NNM3 1639 aa26.56■■□□□ 1.84
LTBP4-222ENST00000598256 RIMBP3Q9UFD9 1639 aa26.56■■□□□ 1.84
LTBP4-222ENST00000598256 TDRD9Q8NDG6 1382 aaKnown RBP26.56■■□□□ 1.84
LTBP4-222ENST00000598256 GAPVD1Q14C86 1478 aa26.54■■□□□ 1.84
LTBP4-222ENST00000598256 AQRO60306 1485 aaKnown RBP eCLIP26.52■■□□□ 1.842e-6■■□□□ 12.6
LTBP4-222ENST00000598256 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
LTBP4-222ENST00000598256 EEA1Q15075 1411 aa26.47■■□□□ 1.83
LTBP4-222ENST00000598256 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
LTBP4-222ENST00000598256 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
LTBP4-222ENST00000598256 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
LTBP4-222ENST00000598256 CUL7Q14999 1698 aa26.41■■□□□ 1.82
LTBP4-222ENST00000598256 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
LTBP4-222ENST00000598256 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
LTBP4-222ENST00000598256 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
LTBP4-222ENST00000598256 MAGI1Q96QZ7 1491 aaPredicted RBP26.33■■□□□ 1.81
LTBP4-222ENST00000598256 CYB5RLQ6IPT4 315 aa26.31■■□□□ 1.8
LTBP4-222ENST00000598256 IGF1RP08069 1367 aa26.29■■□□□ 1.8
LTBP4-222ENST00000598256 CHD1O14646 1710 aa26.28■■□□□ 1.8
LTBP4-222ENST00000598256 CSRNP3Q8WYN3 585 aa26.27■■□□□ 1.8
LTBP4-222ENST00000598256 KIF21BO75037 1637 aa26.24■■□□□ 1.79
LTBP4-222ENST00000598256 FHAD1B1AJZ9 1412 aa26.23■■□□□ 1.79
LTBP4-222ENST00000598256 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
LTBP4-222ENST00000598256 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.79
LTBP4-222ENST00000598256 PRXQ9BXM0 1461 aa26.18■■□□□ 1.78
LTBP4-222ENST00000598256 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
LTBP4-222ENST00000598256 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
LTBP4-222ENST00000598256 TRHP20396 242 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms