RNA–Protein interactions for RNA: ENST00000419744.1

ATRAID-203, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 2

Gene ATRAID, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-203ENST00000419744 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
ATRAID-203ENST00000419744 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
ATRAID-203ENST00000419744 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
ATRAID-203ENST00000419744 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
ATRAID-203ENST00000419744 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
ATRAID-203ENST00000419744 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
ATRAID-203ENST00000419744 ABCC9O60706 1549 aa18.58■□□□□ 0.56
ATRAID-203ENST00000419744 FOXD1Q16676 465 aa18.37■□□□□ 0.53
ATRAID-203ENST00000419744 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
ATRAID-203ENST00000419744 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
ATRAID-203ENST00000419744 ADRA2BP18089 450 aa17.79■□□□□ 0.44
ATRAID-203ENST00000419744 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
ATRAID-203ENST00000419744 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
ATRAID-203ENST00000419744 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
ATRAID-203ENST00000419744 NACADO15069 1562 aa17.34■□□□□ 0.37
ATRAID-203ENST00000419744 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
ATRAID-203ENST00000419744 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATRAID-203ENST00000419744 BICRAQ9NZM4 1560 aa17.12■□□□□ 0.33
ATRAID-203ENST00000419744 MYO15BQ96JP2 1530 aa17.03■□□□□ 0.32
ATRAID-203ENST00000419744 MSH5O43196 834 aa16.92■□□□□ 0.3
ATRAID-203ENST00000419744 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
ATRAID-203ENST00000419744 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
ATRAID-203ENST00000419744 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
ATRAID-203ENST00000419744 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
ATRAID-203ENST00000419744 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
ATRAID-203ENST00000419744 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
ATRAID-203ENST00000419744 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
ATRAID-203ENST00000419744 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
ATRAID-203ENST00000419744 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
ATRAID-203ENST00000419744 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
ATRAID-203ENST00000419744 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
ATRAID-203ENST00000419744 KCNA4P22459 653 aa16.3■□□□□ 0.2
ATRAID-203ENST00000419744 CUX2O14529 1486 aa16.25■□□□□ 0.19
ATRAID-203ENST00000419744 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
ATRAID-203ENST00000419744 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
ATRAID-203ENST00000419744 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
ATRAID-203ENST00000419744 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
ATRAID-203ENST00000419744 NCAPD3P42695 1498 aa16.01■□□□□ 0.15
ATRAID-203ENST00000419744 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
ATRAID-203ENST00000419744 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
ATRAID-203ENST00000419744 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
ATRAID-203ENST00000419744 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
ATRAID-203ENST00000419744 NESP48681 1621 aa15.87■□□□□ 0.13
ATRAID-203ENST00000419744 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
ATRAID-203ENST00000419744 SMARCA2P51531 1590 aa15.83■□□□□ 0.12
ATRAID-203ENST00000419744 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
ATRAID-203ENST00000419744 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
ATRAID-203ENST00000419744 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
ATRAID-203ENST00000419744 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
ATRAID-203ENST00000419744 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
ATRAID-203ENST00000419744 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
ATRAID-203ENST00000419744 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
ATRAID-203ENST00000419744 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
ATRAID-203ENST00000419744 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
ATRAID-203ENST00000419744 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
ATRAID-203ENST00000419744 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
ATRAID-203ENST00000419744 WDR62O43379 1518 aa15.55■□□□□ 0.08
ATRAID-203ENST00000419744 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.07
ATRAID-203ENST00000419744 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
ATRAID-203ENST00000419744 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
ATRAID-203ENST00000419744 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
ATRAID-203ENST00000419744 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
ATRAID-203ENST00000419744 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
ATRAID-203ENST00000419744 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
ATRAID-203ENST00000419744 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
ATRAID-203ENST00000419744 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
ATRAID-203ENST00000419744 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
ATRAID-203ENST00000419744 WIZO95785 1651 aa15.28■□□□□ 0.04
ATRAID-203ENST00000419744 CFTRP13569 1480 aa15.24■□□□□ 0.03
ATRAID-203ENST00000419744 URB2Q14146 1524 aaKnown RBP15.23■□□□□ 0.03
ATRAID-203ENST00000419744 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
ATRAID-203ENST00000419744 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
ATRAID-203ENST00000419744 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
ATRAID-203ENST00000419744 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
ATRAID-203ENST00000419744 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
ATRAID-203ENST00000419744 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0.01
ATRAID-203ENST00000419744 IFT140Q96RY7 1462 aa15.07■□□□□ 0
ATRAID-203ENST00000419744 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
ATRAID-203ENST00000419744 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
ATRAID-203ENST00000419744 ARAP1Q96P48 1450 aa15.02■□□□□ -0
ATRAID-203ENST00000419744 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
ATRAID-203ENST00000419744 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
ATRAID-203ENST00000419744 CHD1O14646 1710 aa14.99□□□□□ -0.01
ATRAID-203ENST00000419744 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
ATRAID-203ENST00000419744 ZBTB22O15209 634 aa14.98□□□□□ -0.01
ATRAID-203ENST00000419744 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
ATRAID-203ENST00000419744 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
ATRAID-203ENST00000419744 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
ATRAID-203ENST00000419744 DNMBPQ6XZF7 1577 aa14.91□□□□□ -0.02
ATRAID-203ENST00000419744 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
ATRAID-203ENST00000419744 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
ATRAID-203ENST00000419744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.036e-8■■□□□ 11.4
ATRAID-203ENST00000419744 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
ATRAID-203ENST00000419744 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.03
ATRAID-203ENST00000419744 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
ATRAID-203ENST00000419744 POLA1P09884 1462 aaPredicted RBP14.81□□□□□ -0.04
ATRAID-203ENST00000419744 WDR97A6NE52 1622 aa14.77□□□□□ -0.05
ATRAID-203ENST00000419744 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
ATRAID-203ENST00000419744 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
ATRAID-203ENST00000419744 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms