RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
CDH2-201ENST00000269141 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
CDH2-201ENST00000269141 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
CDH2-201ENST00000269141 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
CDH2-201ENST00000269141 PELP1Q8IZL8 1130 aaKnown RBP19.02■□□□□ 0.64
CDH2-201ENST00000269141 MYT1Q01538 1121 aa18.84■□□□□ 0.61
CDH2-201ENST00000269141 ABCC9O60706 1549 aa18.44■□□□□ 0.54
CDH2-201ENST00000269141 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
CDH2-201ENST00000269141 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
CDH2-201ENST00000269141 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
CDH2-201ENST00000269141 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
CDH2-201ENST00000269141 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDH2-201ENST00000269141 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
CDH2-201ENST00000269141 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
CDH2-201ENST00000269141 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.42
CDH2-201ENST00000269141 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
CDH2-201ENST00000269141 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
CDH2-201ENST00000269141 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
CDH2-201ENST00000269141 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
CDH2-201ENST00000269141 ERICH6Q7L0X2 663 aa17.46■□□□□ 0.39
CDH2-201ENST00000269141 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
CDH2-201ENST00000269141 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
CDH2-201ENST00000269141 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
CDH2-201ENST00000269141 NACADO15069 1562 aa17.29■□□□□ 0.36
CDH2-201ENST00000269141 HRCP23327 699 aa17.23■□□□□ 0.35
CDH2-201ENST00000269141 APLP2Q06481 763 aa17.22■□□□□ 0.35
CDH2-201ENST00000269141 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
CDH2-201ENST00000269141 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
CDH2-201ENST00000269141 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
CDH2-201ENST00000269141 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
CDH2-201ENST00000269141 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
CDH2-201ENST00000269141 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
CDH2-201ENST00000269141 BCL11AQ9H165 835 aa17■□□□□ 0.31
CDH2-201ENST00000269141 PRKCSHP14314 528 aaPredicted RBP16.97■□□□□ 0.31
CDH2-201ENST00000269141 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
CDH2-201ENST00000269141 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
CDH2-201ENST00000269141 CCER1Q8TC90 406 aaPredicted RBP16.77■□□□□ 0.28
CDH2-201ENST00000269141 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
CDH2-201ENST00000269141 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
CDH2-201ENST00000269141 ITGAEP38570 1179 aa16.74■□□□□ 0.27
CDH2-201ENST00000269141 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
CDH2-201ENST00000269141 GTF3C3Q9Y5Q9 886 aa16.69■□□□□ 0.26
CDH2-201ENST00000269141 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
CDH2-201ENST00000269141 SLC24A1O60721 1099 aa16.67■□□□□ 0.26
CDH2-201ENST00000269141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
CDH2-201ENST00000269141 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
CDH2-201ENST00000269141 P3H3Q8IVL6 736 aa16.64■□□□□ 0.25
CDH2-201ENST00000269141 FBLN2P98095 1184 aa16.64■□□□□ 0.25
CDH2-201ENST00000269141 WIZO95785 1651 aa16.63■□□□□ 0.25
CDH2-201ENST00000269141 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
CDH2-201ENST00000269141 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
CDH2-201ENST00000269141 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
CDH2-201ENST00000269141 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
CDH2-201ENST00000269141 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
CDH2-201ENST00000269141 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
CDH2-201ENST00000269141 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
CDH2-201ENST00000269141 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
CDH2-201ENST00000269141 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
CDH2-201ENST00000269141 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
CDH2-201ENST00000269141 SOGA1O94964 1423 aa16.36■□□□□ 0.21
CDH2-201ENST00000269141 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
CDH2-201ENST00000269141 EIF5BO60841 1220 aaKnown RBP16.35■□□□□ 0.21
CDH2-201ENST00000269141 BICRAQ9NZM4 1560 aa16.31■□□□□ 0.2
CDH2-201ENST00000269141 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
CDH2-201ENST00000269141 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
CDH2-201ENST00000269141 ANP32EQ9BTT0 268 aa16.25■□□□□ 0.19
CDH2-201ENST00000269141 MYT1LQ9UL68 1186 aa16.23■□□□□ 0.19
CDH2-201ENST00000269141 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
CDH2-201ENST00000269141 CLIP1P30622 1438 aa16.16■□□□□ 0.18
CDH2-201ENST00000269141 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
CDH2-201ENST00000269141 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
CDH2-201ENST00000269141 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
CDH2-201ENST00000269141 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
CDH2-201ENST00000269141 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
CDH2-201ENST00000269141 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
CDH2-201ENST00000269141 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
CDH2-201ENST00000269141 EEA1Q15075 1411 aa16.1■□□□□ 0.17
CDH2-201ENST00000269141 CUX2O14529 1486 aa16.09■□□□□ 0.17
CDH2-201ENST00000269141 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
CDH2-201ENST00000269141 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
CDH2-201ENST00000269141 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
CDH2-201ENST00000269141 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
CDH2-201ENST00000269141 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
CDH2-201ENST00000269141 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
CDH2-201ENST00000269141 NCAPD3P42695 1498 aa16.01■□□□□ 0.15
CDH2-201ENST00000269141 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
CDH2-201ENST00000269141 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
CDH2-201ENST00000269141 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
CDH2-201ENST00000269141 POLR3GLQ9BT43 218 aa15.97■□□□□ 0.15
CDH2-201ENST00000269141 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
CDH2-201ENST00000269141 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
CDH2-201ENST00000269141 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
CDH2-201ENST00000269141 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
CDH2-201ENST00000269141 NESP48681 1621 aa15.91■□□□□ 0.14
CDH2-201ENST00000269141 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
CDH2-201ENST00000269141 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
CDH2-201ENST00000269141 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
CDH2-201ENST00000269141 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
CDH2-201ENST00000269141 CDK11AQ9UQ88 783 aaPredicted RBP15.87■□□□□ 0.13
CDH2-201ENST00000269141 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms