RNA–Protein interactions for RNA: ENST00000598055.1

LTBP4-219, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-219ENST00000598055 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
LTBP4-219ENST00000598055 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
LTBP4-219ENST00000598055 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
LTBP4-219ENST00000598055 ABCC9O60706 1549 aa25.18■■□□□ 1.62
LTBP4-219ENST00000598055 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
LTBP4-219ENST00000598055 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
LTBP4-219ENST00000598055 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
LTBP4-219ENST00000598055 NACADO15069 1562 aa24.76■■□□□ 1.55
LTBP4-219ENST00000598055 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
LTBP4-219ENST00000598055 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
LTBP4-219ENST00000598055 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
LTBP4-219ENST00000598055 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
LTBP4-219ENST00000598055 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
LTBP4-219ENST00000598055 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
LTBP4-219ENST00000598055 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
LTBP4-219ENST00000598055 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
LTBP4-219ENST00000598055 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
LTBP4-219ENST00000598055 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
LTBP4-219ENST00000598055 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
LTBP4-219ENST00000598055 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
LTBP4-219ENST00000598055 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
LTBP4-219ENST00000598055 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
LTBP4-219ENST00000598055 WIZO95785 1651 aa23■■□□□ 1.27
LTBP4-219ENST00000598055 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
LTBP4-219ENST00000598055 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
LTBP4-219ENST00000598055 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
LTBP4-219ENST00000598055 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
LTBP4-219ENST00000598055 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
LTBP4-219ENST00000598055 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
LTBP4-219ENST00000598055 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
LTBP4-219ENST00000598055 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
LTBP4-219ENST00000598055 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
LTBP4-219ENST00000598055 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
LTBP4-219ENST00000598055 CFTRP13569 1480 aa22.22■■□□□ 1.15
LTBP4-219ENST00000598055 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
LTBP4-219ENST00000598055 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
LTBP4-219ENST00000598055 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
LTBP4-219ENST00000598055 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
LTBP4-219ENST00000598055 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
LTBP4-219ENST00000598055 NESP48681 1621 aa21.97■■□□□ 1.11
LTBP4-219ENST00000598055 WRNQ14191 1432 aaPredicted RBP eCLIP21.96■■□□□ 1.11
LTBP4-219ENST00000598055 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
LTBP4-219ENST00000598055 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
LTBP4-219ENST00000598055 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
LTBP4-219ENST00000598055 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
LTBP4-219ENST00000598055 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
LTBP4-219ENST00000598055 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.07
LTBP4-219ENST00000598055 CUX1P39880 1505 aa21.75■■□□□ 1.07
LTBP4-219ENST00000598055 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
LTBP4-219ENST00000598055 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
LTBP4-219ENST00000598055 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
LTBP4-219ENST00000598055 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
LTBP4-219ENST00000598055 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
LTBP4-219ENST00000598055 URB2Q14146 1524 aaKnown RBP21.63■■□□□ 1.05
LTBP4-219ENST00000598055 EEA1Q15075 1411 aa21.61■■□□□ 1.05
LTBP4-219ENST00000598055 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.05
LTBP4-219ENST00000598055 WDR62O43379 1518 aa21.54■■□□□ 1.04
LTBP4-219ENST00000598055 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.03
LTBP4-219ENST00000598055 SOGA1O94964 1423 aa21.49■■□□□ 1.03
LTBP4-219ENST00000598055 FAM9AQ8IZU1 332 aaPredicted RBP21.48■■□□□ 1.03
LTBP4-219ENST00000598055 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
LTBP4-219ENST00000598055 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
LTBP4-219ENST00000598055 ABCA10Q8WWZ4 1543 aa21.44■■□□□ 1.02
LTBP4-219ENST00000598055 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
LTBP4-219ENST00000598055 CUX2O14529 1486 aa21.41■■□□□ 1.02
LTBP4-219ENST00000598055 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.02
LTBP4-219ENST00000598055 IFT140Q96RY7 1462 aa21.39■■□□□ 1.01
LTBP4-219ENST00000598055 RUSC2Q8N2Y8 1516 aa21.37■■□□□ 1.01
LTBP4-219ENST00000598055 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1.01
LTBP4-219ENST00000598055 WDR97A6NE52 1622 aa21.31■■□□□ 1
LTBP4-219ENST00000598055 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
LTBP4-219ENST00000598055 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
LTBP4-219ENST00000598055 IGF1RP08069 1367 aa21.24■□□□□ 0.99
LTBP4-219ENST00000598055 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
LTBP4-219ENST00000598055 KIF21BO75037 1637 aa21.23■□□□□ 0.99
LTBP4-219ENST00000598055 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
LTBP4-219ENST00000598055 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
LTBP4-219ENST00000598055 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
LTBP4-219ENST00000598055 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
LTBP4-219ENST00000598055 CUL7Q14999 1698 aa21.16■□□□□ 0.98
LTBP4-219ENST00000598055 GRIN2BQ13224 1484 aa21.16■□□□□ 0.98
LTBP4-219ENST00000598055 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
LTBP4-219ENST00000598055 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.986e-7■■■■□ 21.7
LTBP4-219ENST00000598055 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
LTBP4-219ENST00000598055 RAPGEF2Q9Y4G8 1499 aa21.13■□□□□ 0.97
LTBP4-219ENST00000598055 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
LTBP4-219ENST00000598055 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
LTBP4-219ENST00000598055 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
LTBP4-219ENST00000598055 TNIKQ9UKE5 1360 aa21.1■□□□□ 0.97
LTBP4-219ENST00000598055 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
LTBP4-219ENST00000598055 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
LTBP4-219ENST00000598055 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
LTBP4-219ENST00000598055 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
LTBP4-219ENST00000598055 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
LTBP4-219ENST00000598055 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
LTBP4-219ENST00000598055 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
LTBP4-219ENST00000598055 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
LTBP4-219ENST00000598055 GRIN2AQ12879 1464 aa20.86■□□□□ 0.93
LTBP4-219ENST00000598055 CLIP1P30622 1438 aa20.84■□□□□ 0.93
LTBP4-219ENST00000598055 FBLN2P98095 1184 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms