RNA–Protein interactions for RNA: ENST00000448392.5

TMEM87A-203, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 3,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-203ENST00000448392 NISCHQ9Y2I1 1504 aa18.01■□□□□ 0.47
TMEM87A-203ENST00000448392 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
TMEM87A-203ENST00000448392 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
TMEM87A-203ENST00000448392 ZCCHC6Q5VYS8 1495 aaKnown RBP15.25■□□□□ 0.03
TMEM87A-203ENST00000448392 DCAF8L2P0C7V8 631 aa15.22■□□□□ 0.03
TMEM87A-203ENST00000448392 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
TMEM87A-203ENST00000448392 CHIC1Q5VXU3 224 aa15.12■□□□□ 0.01
TMEM87A-203ENST00000448392 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
TMEM87A-203ENST00000448392 HRCP23327 699 aa14.97□□□□□ -0.01
TMEM87A-203ENST00000448392 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
TMEM87A-203ENST00000448392 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
TMEM87A-203ENST00000448392 PPARGC1BQ86YN6 1023 aaKnown RBP14.79□□□□□ -0.04
TMEM87A-203ENST00000448392 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
TMEM87A-203ENST00000448392 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
TMEM87A-203ENST00000448392 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
TMEM87A-203ENST00000448392 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
TMEM87A-203ENST00000448392 ABCC9O60706 1549 aa14.41□□□□□ -0.1
TMEM87A-203ENST00000448392 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
TMEM87A-203ENST00000448392 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
TMEM87A-203ENST00000448392 SCRIBQ14160 1630 aa14.39□□□□□ -0.11
TMEM87A-203ENST00000448392 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
TMEM87A-203ENST00000448392 ZEB1P37275 1124 aaPredicted RBP14.17□□□□□ -0.14
TMEM87A-203ENST00000448392 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
TMEM87A-203ENST00000448392 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.15
TMEM87A-203ENST00000448392 WIZO95785 1651 aa14□□□□□ -0.17
TMEM87A-203ENST00000448392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
TMEM87A-203ENST00000448392 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
TMEM87A-203ENST00000448392 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
TMEM87A-203ENST00000448392 NACADO15069 1562 aa13.95□□□□□ -0.18
TMEM87A-203ENST00000448392 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
TMEM87A-203ENST00000448392 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
TMEM87A-203ENST00000448392 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
TMEM87A-203ENST00000448392 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
TMEM87A-203ENST00000448392 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
TMEM87A-203ENST00000448392 SOGA1O94964 1423 aa13.76□□□□□ -0.21
TMEM87A-203ENST00000448392 NEUROD1Q13562 356 aa13.75□□□□□ -0.21
TMEM87A-203ENST00000448392 CEP162Q5TB80 1403 aa13.74□□□□□ -0.21
TMEM87A-203ENST00000448392 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
TMEM87A-203ENST00000448392 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
TMEM87A-203ENST00000448392 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
TMEM87A-203ENST00000448392 PELP1Q8IZL8 1130 aaKnown RBP13.72□□□□□ -0.21
TMEM87A-203ENST00000448392 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.22
TMEM87A-203ENST00000448392 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
TMEM87A-203ENST00000448392 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
TMEM87A-203ENST00000448392 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
TMEM87A-203ENST00000448392 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
TMEM87A-203ENST00000448392 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
TMEM87A-203ENST00000448392 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
TMEM87A-203ENST00000448392 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM87A-203ENST00000448392 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
TMEM87A-203ENST00000448392 CENPBP07199 599 aaPredicted RBP13.58□□□□□ -0.23
TMEM87A-203ENST00000448392 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.23
TMEM87A-203ENST00000448392 RANGAP1P46060 587 aaPredicted RBP13.56□□□□□ -0.24
TMEM87A-203ENST00000448392 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
TMEM87A-203ENST00000448392 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
TMEM87A-203ENST00000448392 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
TMEM87A-203ENST00000448392 EEA1Q15075 1411 aa13.53□□□□□ -0.24
TMEM87A-203ENST00000448392 UNC13AQ9UPW8 1703 aa13.51□□□□□ -0.25
TMEM87A-203ENST00000448392 MIER1Q8N108 512 aa13.45□□□□□ -0.26
TMEM87A-203ENST00000448392 CLIP1P30622 1438 aa13.44□□□□□ -0.26
TMEM87A-203ENST00000448392 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
TMEM87A-203ENST00000448392 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
TMEM87A-203ENST00000448392 APLP2Q06481 763 aa13.41□□□□□ -0.26
TMEM87A-203ENST00000448392 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
TMEM87A-203ENST00000448392 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
TMEM87A-203ENST00000448392 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
TMEM87A-203ENST00000448392 KIF21BO75037 1637 aa13.34□□□□□ -0.27
TMEM87A-203ENST00000448392 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
TMEM87A-203ENST00000448392 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
TMEM87A-203ENST00000448392 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
TMEM87A-203ENST00000448392 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
TMEM87A-203ENST00000448392 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.3
TMEM87A-203ENST00000448392 ITGAEP38570 1179 aa13.2□□□□□ -0.3
TMEM87A-203ENST00000448392 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
TMEM87A-203ENST00000448392 TOP2BQ02880 1626 aa13.17□□□□□ -0.3
TMEM87A-203ENST00000448392 PRXQ9BXM0 1461 aa13.14□□□□□ -0.31
TMEM87A-203ENST00000448392 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
TMEM87A-203ENST00000448392 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
TMEM87A-203ENST00000448392 CUX1P39880 1505 aa13.08□□□□□ -0.32
TMEM87A-203ENST00000448392 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
TMEM87A-203ENST00000448392 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
TMEM87A-203ENST00000448392 CCNB3Q8WWL7 1395 aa13.06□□□□□ -0.32
TMEM87A-203ENST00000448392 RRBP1Q9P2E9 1410 aaKnown RBP13.06□□□□□ -0.32
TMEM87A-203ENST00000448392 SUPT16HQ9Y5B9 1047 aaKnown RBP13.05□□□□□ -0.32
TMEM87A-203ENST00000448392 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
TMEM87A-203ENST00000448392 ARHGAP35Q9NRY4 1499 aa13.03□□□□□ -0.32
TMEM87A-203ENST00000448392 MYT1Q01538 1121 aa13□□□□□ -0.33
TMEM87A-203ENST00000448392 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
TMEM87A-203ENST00000448392 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
TMEM87A-203ENST00000448392 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
TMEM87A-203ENST00000448392 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
TMEM87A-203ENST00000448392 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
TMEM87A-203ENST00000448392 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
TMEM87A-203ENST00000448392 CUX2O14529 1486 aa12.95□□□□□ -0.34
TMEM87A-203ENST00000448392 CFTRP13569 1480 aa12.94□□□□□ -0.34
TMEM87A-203ENST00000448392 IGF1RP08069 1367 aa12.94□□□□□ -0.34
TMEM87A-203ENST00000448392 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
TMEM87A-203ENST00000448392 DDX10Q13206 875 aaKnown RBP12.93□□□□□ -0.34
TMEM87A-203ENST00000448392 BCANQ96GW7 911 aa12.92□□□□□ -0.34
TMEM87A-203ENST00000448392 MAPKBP1O60336 1514 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms