RNA–Protein interactions for RNA: ENST00000492305.1

TSPAN9-205, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 692 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-205ENST00000492305 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
TSPAN9-205ENST00000492305 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
TSPAN9-205ENST00000492305 ABCC9O60706 1549 aa25.08■■□□□ 1.61
TSPAN9-205ENST00000492305 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
TSPAN9-205ENST00000492305 NACADO15069 1562 aa23.85■■□□□ 1.41
TSPAN9-205ENST00000492305 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
TSPAN9-205ENST00000492305 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
TSPAN9-205ENST00000492305 UNC13AQ9UPW8 1703 aa23.6■■□□□ 1.37
TSPAN9-205ENST00000492305 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
TSPAN9-205ENST00000492305 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
TSPAN9-205ENST00000492305 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
TSPAN9-205ENST00000492305 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
TSPAN9-205ENST00000492305 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
TSPAN9-205ENST00000492305 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
TSPAN9-205ENST00000492305 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
TSPAN9-205ENST00000492305 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
TSPAN9-205ENST00000492305 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
TSPAN9-205ENST00000492305 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
TSPAN9-205ENST00000492305 SMARCA4P51532 1647 aa22.15■■□□□ 1.14
TSPAN9-205ENST00000492305 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
TSPAN9-205ENST00000492305 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
TSPAN9-205ENST00000492305 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
TSPAN9-205ENST00000492305 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
TSPAN9-205ENST00000492305 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
TSPAN9-205ENST00000492305 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
TSPAN9-205ENST00000492305 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
TSPAN9-205ENST00000492305 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
TSPAN9-205ENST00000492305 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
TSPAN9-205ENST00000492305 PEG3Q9GZU2 1588 aa21.84■■□□□ 1.09
TSPAN9-205ENST00000492305 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
TSPAN9-205ENST00000492305 WIZO95785 1651 aa21.75■■□□□ 1.07
TSPAN9-205ENST00000492305 NESP48681 1621 aa21.64■■□□□ 1.05
TSPAN9-205ENST00000492305 ERCC6Q03468 1493 aa21.64■■□□□ 1.05
TSPAN9-205ENST00000492305 LAMC3Q9Y6N6 1575 aa21.5■■□□□ 1.03
TSPAN9-205ENST00000492305 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
TSPAN9-205ENST00000492305 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
TSPAN9-205ENST00000492305 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
TSPAN9-205ENST00000492305 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
TSPAN9-205ENST00000492305 CUX2O14529 1486 aa21.39■■□□□ 1.02
TSPAN9-205ENST00000492305 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
TSPAN9-205ENST00000492305 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
TSPAN9-205ENST00000492305 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
TSPAN9-205ENST00000492305 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
TSPAN9-205ENST00000492305 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
TSPAN9-205ENST00000492305 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
TSPAN9-205ENST00000492305 CFTRP13569 1480 aa21.16■□□□□ 0.98
TSPAN9-205ENST00000492305 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
TSPAN9-205ENST00000492305 WDR62O43379 1518 aa21.12■□□□□ 0.97
TSPAN9-205ENST00000492305 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
TSPAN9-205ENST00000492305 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
TSPAN9-205ENST00000492305 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
TSPAN9-205ENST00000492305 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
TSPAN9-205ENST00000492305 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
TSPAN9-205ENST00000492305 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
TSPAN9-205ENST00000492305 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
TSPAN9-205ENST00000492305 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
TSPAN9-205ENST00000492305 TARBP1Q13395 1621 aaKnown RBP20.61■□□□□ 0.89
TSPAN9-205ENST00000492305 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
TSPAN9-205ENST00000492305 CUX1P39880 1505 aa20.58■□□□□ 0.89
TSPAN9-205ENST00000492305 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
TSPAN9-205ENST00000492305 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
TSPAN9-205ENST00000492305 CHD1O14646 1710 aa20.49■□□□□ 0.87
TSPAN9-205ENST00000492305 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.872e-7■■■■■ 29
TSPAN9-205ENST00000492305 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
TSPAN9-205ENST00000492305 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
TSPAN9-205ENST00000492305 SOGA1O94964 1423 aa20.45■□□□□ 0.86
TSPAN9-205ENST00000492305 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
TSPAN9-205ENST00000492305 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
TSPAN9-205ENST00000492305 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
TSPAN9-205ENST00000492305 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
TSPAN9-205ENST00000492305 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
TSPAN9-205ENST00000492305 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
TSPAN9-205ENST00000492305 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
TSPAN9-205ENST00000492305 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
TSPAN9-205ENST00000492305 FBLN2P98095 1184 aa20.29■□□□□ 0.84
TSPAN9-205ENST00000492305 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
TSPAN9-205ENST00000492305 RIMBP3CA6NJZ7 1639 aa20.28■□□□□ 0.84
TSPAN9-205ENST00000492305 RIMBP3BA6NNM3 1639 aa20.28■□□□□ 0.84
TSPAN9-205ENST00000492305 RIMBP3Q9UFD9 1639 aa20.28■□□□□ 0.84
TSPAN9-205ENST00000492305 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
TSPAN9-205ENST00000492305 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
TSPAN9-205ENST00000492305 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
TSPAN9-205ENST00000492305 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
TSPAN9-205ENST00000492305 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
TSPAN9-205ENST00000492305 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
TSPAN9-205ENST00000492305 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
TSPAN9-205ENST00000492305 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
TSPAN9-205ENST00000492305 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
TSPAN9-205ENST00000492305 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
TSPAN9-205ENST00000492305 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
TSPAN9-205ENST00000492305 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
TSPAN9-205ENST00000492305 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
TSPAN9-205ENST00000492305 CEP170Q5SW79 1584 aa20.02■□□□□ 0.8
TSPAN9-205ENST00000492305 IGF1RP08069 1367 aa20.01■□□□□ 0.79
TSPAN9-205ENST00000492305 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
TSPAN9-205ENST00000492305 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
TSPAN9-205ENST00000492305 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
TSPAN9-205ENST00000492305 NUP160Q12769 1436 aa19.91■□□□□ 0.78
TSPAN9-205ENST00000492305 CUL7Q14999 1698 aa19.91■□□□□ 0.78
TSPAN9-205ENST00000492305 ERCC6L2Q5T890 1561 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms