Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.366e-6■■■□□ 17.7
SRSF1Q07955 SAT1-206ENST00000463236 735 ntTSL 35.55□□□□□ -1.526e-6■■■□□ 17.7
SRSF1Q07955 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.262e-9■■■□□ 17.7
SRSF1Q07955 OGT-211ENST00000498566 601 ntTSL 35.52□□□□□ -1.531e-23■■■□□ 17.7
SRSF1Q07955 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.395e-10■■■□□ 17.7
SRSF1Q07955 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.39■□□□□ 0.374e-10■■■□□ 17.7
SRSF1Q07955 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.265e-10■■■□□ 17.7
SRSF1Q07955 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.124e-10■■■□□ 17.7
SRSF1Q07955 KLF3-202ENST00000482150 517 ntTSL 213.42□□□□□ -0.264e-10■■■□□ 17.7
SRSF1Q07955 CCSAP-204ENST00000483092 3492 ntTSL 1 (best)12.55□□□□□ -0.45e-10■■■□□ 17.7
SRSF1Q07955 ACAP3-203ENST00000354980 582 ntTSL 512.57□□□□□ -0.43e-13■■■□□ 17.7
SRSF1Q07955 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.171e-6■■■□□ 17.7
SRSF1Q07955 SFPQ-205ENST00000468598 2835 ntTSL 1 (best)5.72□□□□□ -1.491e-8■■■□□ 17.7
SRSF1Q07955 SFPQ-203ENST00000466213 1431 ntTSL 1 (best)5.4□□□□□ -1.541e-8■■■□□ 17.7
SRSF1Q07955 SFPQ-204ENST00000466745 662 ntTSL 24.33□□□□□ -1.721e-8■■■□□ 17.7
SRSF1Q07955 FDFT1-203ENST00000446331 1558 ntTSL 219.37■□□□□ 0.693e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.25■□□□□ 0.513e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.313e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-207ENST00000525607 1773 ntTSL 216.64■□□□□ 0.253e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.21■□□□□ 0.033e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.38□□□□□ -0.113e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.413e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.423e-7■■■□□ 17.7
SRSF1Q07955 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.85□□□□□ -1.473e-7■■■□□ 17.7
SRSF1Q07955 ARFIP2-207ENST00000529847 920 ntTSL 220.68■□□□□ 0.97e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.35■□□□□ 0.858e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.558e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-208ENST00000530410 971 ntTSL 218.16■□□□□ 0.57e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.09■□□□□ 0.498e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.7■□□□□ 0.268e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-209ENST00000531037 1560 ntTSL 315.53■□□□□ 0.088e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.248e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-206ENST00000525329 563 ntTSL 412.96□□□□□ -0.337e-10■■■□□ 17.6
SRSF1Q07955 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.15□□□□□ -0.798e-10■■■□□ 17.6
SRSF1Q07955 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC10.22□□□□□ -0.775e-11■■■□□ 17.6
SRSF1Q07955 CAPZA2-202ENST00000414148 360 ntTSL 515.91■□□□□ 0.141e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-211ENST00000484325 324 ntTSL 1 (best)9.94□□□□□ -0.821e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.11e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-206ENST00000461878 621 ntTSL 1 (best)7□□□□□ -1.291e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.51□□□□□ -1.531e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-210ENST00000466023 626 ntTSL 34.93□□□□□ -1.621e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-204ENST00000426421 1214 ntTSL 54.3□□□□□ -1.721e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-203ENST00000417431 517 ntTSL 34.03□□□□□ -1.761e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-208ENST00000464669 898 ntTSL 23.95□□□□□ -1.781e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-205ENST00000449080 814 ntTSL 53.81□□□□□ -1.81e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-207ENST00000464223 164 ntTSL 1 (best)3.72□□□□□ -1.811e-13■■■□□ 17.6
SRSF1Q07955 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.7□□□□□ -1.821e-13■■■□□ 17.6
SRSF1Q07955 PUM1-215ENST00000525948 1103 ntTSL 310.67□□□□□ -0.73e-8■■■□□ 17.6
SRSF1Q07955 PUM1-218ENST00000526215 586 ntTSL 27.12□□□□□ -1.273e-8■■■□□ 17.6
SRSF1Q07955 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.195e-7■■■□□ 17.6
SRSF1Q07955 UBAC1-206ENST00000489050 864 ntTSL 310.24□□□□□ -0.777e-9■■■□□ 17.6
SRSF1Q07955 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.413e-6■■■□□ 17.6
SRSF1Q07955 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.33□□□□□ -0.63e-6■■■□□ 17.6
SRSF1Q07955 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.88□□□□□ -0.673e-6■■■□□ 17.6
SRSF1Q07955 ZGPAT-210ENST00000478385 935 ntTSL 216.47■□□□□ 0.231e-8■■■□□ 17.6
SRSF1Q07955 CLCN7-214ENST00000569851 1014 ntTSL 513.64□□□□□ -0.234e-6■■■□□ 17.6
SRSF1Q07955 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.261e-5■■■□□ 17.6
SRSF1Q07955 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.371e-5■■■□□ 17.6
SRSF1Q07955 ZNF514-203ENST00000447814 554 ntTSL 47.66□□□□□ -1.181e-5■■■□□ 17.6
SRSF1Q07955 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.348e-8■■■□□ 17.6
SRSF1Q07955 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.382e-10■■■□□ 17.6
SRSF1Q07955 OAZ1-201ENST00000581150 1131 ntTSL 516.43■□□□□ 0.222e-10■■■□□ 17.6
SRSF1Q07955 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.112e-10■■■□□ 17.6
SRSF1Q07955 OAZ1-210ENST00000593012 1357 ntTSL 214.8□□□□□ -0.042e-10■■■□□ 17.6
SRSF1Q07955 OAZ1-207ENST00000590943 1012 ntTSL 214.67□□□□□ -0.062e-10■■■□□ 17.6
SRSF1Q07955 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.346e-8■■■□□ 17.6
SRSF1Q07955 DDX55-211ENST00000544429 574 ntTSL 417.49■□□□□ 0.392e-8■■■□□ 17.5
SRSF1Q07955 DDX55-213ENST00000545042 450 ntTSL 512.29□□□□□ -0.442e-8■■■□□ 17.5
SRSF1Q07955 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.1□□□□□ -1.752e-7■■■□□ 17.5
SRSF1Q07955 EXOC7-208ENST00000420116 543 ntTSL 410.84□□□□□ -0.674e-8■■■□□ 17.5
SRSF1Q07955 EXOC7-209ENST00000442951 583 ntTSL 29.4□□□□□ -0.94e-8■■■□□ 17.5
SRSF1Q07955 EXOC7-204ENST00000405068 2958 ntTSL 29.1□□□□□ -0.954e-8■■■□□ 17.5
SRSF1Q07955 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.64□□□□□ -0.399e-9■■■□□ 17.5
SRSF1Q07955 HSP90B1-209ENST00000552051 581 ntTSL 28.59□□□□□ -1.032e-25■■■□□ 17.5
SRSF1Q07955 TSSC2-206ENST00000533775 1210 ntTSL 518.83■□□□□ 0.62e-6■■■□□ 17.5
SRSF1Q07955 TSSC2-202ENST00000526284 1244 ntTSL 1 (best)15.94■□□□□ 0.142e-6■■■□□ 17.5
SRSF1Q07955 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.46□□□□□ -0.412e-6■■■□□ 17.5
SRSF1Q07955 TSSC2-203ENST00000526488 674 ntTSL 311.75□□□□□ -0.532e-6■■■□□ 17.5
SRSF1Q07955 CHD2-229ENST00000637789 904 ntTSL 511.33□□□□□ -0.65e-7■■■□□ 17.5
SRSF1Q07955 RBM39-215ENST00000442447 644 ntTSL 215.21■□□□□ 0.032e-54■■■□□ 17.5
SRSF1Q07955 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.58□□□□□ -0.085e-31■■■□□ 17.5
SRSF1Q07955 RBM39-204ENST00000374038 1026 ntTSL 514.04□□□□□ -0.165e-31■■■□□ 17.5
SRSF1Q07955 RBM39-219ENST00000453310 1068 ntTSL 214.04□□□□□ -0.165e-31■■■□□ 17.5
SRSF1Q07955 RBM39-207ENST00000412738 1018 ntTSL 313.06□□□□□ -0.322e-54■■■□□ 17.5
SRSF1Q07955 RBM39-213ENST00000433027 611 ntTSL 513.05□□□□□ -0.325e-31■■■□□ 17.5
SRSF1Q07955 RBM39-224ENST00000463098 869 ntTSL 212.93□□□□□ -0.345e-31■■■□□ 17.5
SRSF1Q07955 RBM39-214ENST00000434927 716 ntTSL 59.15□□□□□ -0.942e-54■■■□□ 17.5
SRSF1Q07955 RBM39-218ENST00000449489 432 ntTSL 57.87□□□□□ -1.152e-54■■■□□ 17.5
SRSF1Q07955 RBM39-208ENST00000416108 577 ntTSL 47.19□□□□□ -1.262e-54■■■□□ 17.5
SRSF1Q07955 RBM39-209ENST00000416529 594 ntTSL 36.97□□□□□ -1.292e-54■■■□□ 17.5
SRSF1Q07955 RBM39-211ENST00000426951 840 ntTSL 1 (best)4.55□□□□□ -1.682e-54■■■□□ 17.5
SRSF1Q07955 RBM39-210ENST00000425184 526 ntTSL 34.41□□□□□ -1.72e-54■■■□□ 17.5
SRSF1Q07955 RBM39-220ENST00000455343 441 ntTSL 53.94□□□□□ -1.782e-54■■■□□ 17.5
SRSF1Q07955 NECAB3-220ENST00000606699 1022 ntTSL 218.59■□□□□ 0.578e-11■■■□□ 17.5
SRSF1Q07955 NECAB3-214ENST00000493590 625 ntTSL 517.41■□□□□ 0.388e-11■■■□□ 17.5
SRSF1Q07955 NECAB3-205ENST00000473892 438 ntTSL 212.74□□□□□ -0.378e-11■■■□□ 17.5
SRSF1Q07955 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.148e-9■■■□□ 17.5
SRSF1Q07955 PILRB-209ENST00000455145 902 ntTSL 513.72□□□□□ -0.211e-8■■■□□ 17.4
SRSF1Q07955 STAG3L5P-PVRIG2P-PILRB-204ENST00000472646 553 ntTSL 510.59□□□□□ -0.711e-8■■■□□ 17.4
SRSF1Q07955 PILRB-211ENST00000493091 4345 ntTSL 210.47□□□□□ -0.731e-8■■■□□ 17.4
Retrieved 100 of 14,836 protein–RNA pairs in 81.5 ms