RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
RBM39-220ENST00000455343 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
RBM39-220ENST00000455343 SENP3Q9H4L4 574 aaPredicted RBP15.33■□□□□ 0.04
RBM39-220ENST00000455343 PHF23Q9BUL5 403 aaPredicted RBP15.13■□□□□ 0.01
RBM39-220ENST00000455343 FOXD1Q16676 465 aa14.26□□□□□ -0.13
RBM39-220ENST00000455343 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
RBM39-220ENST00000455343 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
RBM39-220ENST00000455343 ADRA2BP18089 450 aa13.39□□□□□ -0.27
RBM39-220ENST00000455343 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
RBM39-220ENST00000455343 MSH5O43196 834 aa13.3□□□□□ -0.28
RBM39-220ENST00000455343 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
RBM39-220ENST00000455343 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
RBM39-220ENST00000455343 SCAF1Q9H7N4 1312 aaKnown RBP12.24□□□□□ -0.45
RBM39-220ENST00000455343 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
RBM39-220ENST00000455343 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
RBM39-220ENST00000455343 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
RBM39-220ENST00000455343 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
RBM39-220ENST00000455343 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
RBM39-220ENST00000455343 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
RBM39-220ENST00000455343 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
RBM39-220ENST00000455343 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
RBM39-220ENST00000455343 KCNA4P22459 653 aa11.42□□□□□ -0.58
RBM39-220ENST00000455343 RNF39Q9H2S5 420 aa11.36□□□□□ -0.59
RBM39-220ENST00000455343 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
RBM39-220ENST00000455343 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
RBM39-220ENST00000455343 C1QBPQ07021 282 aaKnown RBP11.2□□□□□ -0.62
RBM39-220ENST00000455343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.629e-14■■□□□ 11.4
RBM39-220ENST00000455343 U3KPZ7 1027 aaPredicted RBP11.01□□□□□ -0.65
RBM39-220ENST00000455343 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
RBM39-220ENST00000455343 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
RBM39-220ENST00000455343 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
RBM39-220ENST00000455343 CAPN15O75808 1086 aa10.76□□□□□ -0.69
RBM39-220ENST00000455343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
RBM39-220ENST00000455343 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
RBM39-220ENST00000455343 APLP2Q06481 763 aa10.71□□□□□ -0.69
RBM39-220ENST00000455343 DSG3P32926 999 aa10.68□□□□□ -0.7
RBM39-220ENST00000455343 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
RBM39-220ENST00000455343 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
RBM39-220ENST00000455343 FOXD4L1Q9NU39 408 aa10.63□□□□□ -0.71
RBM39-220ENST00000455343 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
RBM39-220ENST00000455343 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
RBM39-220ENST00000455343 ABCB7O75027 752 aa10.53□□□□□ -0.72
RBM39-220ENST00000455343 ZBTB22O15209 634 aa10.51□□□□□ -0.73
RBM39-220ENST00000455343 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
RBM39-220ENST00000455343 POLA2Q14181 598 aa10.36□□□□□ -0.75
RBM39-220ENST00000455343 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
RBM39-220ENST00000455343 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
RBM39-220ENST00000455343 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
RBM39-220ENST00000455343 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
RBM39-220ENST00000455343 EHMT2Q96KQ7 1210 aa10.06□□□□□ -0.8
RBM39-220ENST00000455343 OSCARQ8IYS5 282 aa10.05□□□□□ -0.8
RBM39-220ENST00000455343 POTEHQ6S545 545 aa10.02□□□□□ -0.81
RBM39-220ENST00000455343 AKT1S1Q96B36 256 aa9.99□□□□□ -0.81
RBM39-220ENST00000455343 FBLN2P98095 1184 aa9.98□□□□□ -0.81
RBM39-220ENST00000455343 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
RBM39-220ENST00000455343 CHRDL2Q6WN34 429 aa9.91□□□□□ -0.82
RBM39-220ENST00000455343 SPDYE2BA6NHP3 402 aa9.88□□□□□ -0.83
RBM39-220ENST00000455343 SPDYE6P0CI01 402 aa9.88□□□□□ -0.83
RBM39-220ENST00000455343 SPDYE2Q495Y8 402 aa9.88□□□□□ -0.83
RBM39-220ENST00000455343 REM2Q8IYK8 340 aaPredicted RBP9.88□□□□□ -0.83
RBM39-220ENST00000455343 PITPNM1O00562 1244 aa9.79□□□□□ -0.84
RBM39-220ENST00000455343 SSUH2Q9Y2M2 353 aa9.78□□□□□ -0.84
RBM39-220ENST00000455343 ZNF692Q9BU19 519 aaPredicted RBP9.76□□□□□ -0.85
RBM39-220ENST00000455343 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
RBM39-220ENST00000455343 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.867e-33■■□□□ 11.8
RBM39-220ENST00000455343 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
RBM39-220ENST00000455343 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
RBM39-220ENST00000455343 CLEC11AQ9Y240 323 aa9.63□□□□□ -0.87
RBM39-220ENST00000455343 PRKAR2AP13861 404 aaKnown RBP9.53□□□□□ -0.88
RBM39-220ENST00000455343 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
RBM39-220ENST00000455343 PRR29P0C7W0 189 aa9.49□□□□□ -0.89
RBM39-220ENST00000455343 NISCHQ9Y2I1 1504 aa9.49□□□□□ -0.89
RBM39-220ENST00000455343 HAX1O00165 279 aa9.47□□□□□ -0.89
RBM39-220ENST00000455343 SP7Q8TDD2 431 aaPredicted RBP9.46□□□□□ -0.9
RBM39-220ENST00000455343 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
RBM39-220ENST00000455343 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
RBM39-220ENST00000455343 EVX2Q03828 476 aa9.38□□□□□ -0.91
RBM39-220ENST00000455343 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
RBM39-220ENST00000455343 PROM2Q8N271 834 aa9.34□□□□□ -0.91
RBM39-220ENST00000455343 FARP1Q9Y4F1 1045 aaPredicted RBP9.32□□□□□ -0.92
RBM39-220ENST00000455343 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
RBM39-220ENST00000455343 CD44P16070 742 aaKnown RBP9.23□□□□□ -0.93
RBM39-220ENST00000455343 GABBR2O75899 941 aa9.18□□□□□ -0.94
RBM39-220ENST00000455343 FKBP8Q14318 412 aa9.18□□□□□ -0.94
RBM39-220ENST00000455343 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
RBM39-220ENST00000455343 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
RBM39-220ENST00000455343 ZRANB1Q9UGI0 708 aa9.12□□□□□ -0.95
RBM39-220ENST00000455343 ZNF579Q8NAF0 562 aaKnown RBP9.11□□□□□ -0.95
RBM39-220ENST00000455343 CLCN6P51797 869 aa9.08□□□□□ -0.96
RBM39-220ENST00000455343 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
RBM39-220ENST00000455343 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
RBM39-220ENST00000455343 MIER1Q8N108 512 aa9.04□□□□□ -0.96
RBM39-220ENST00000455343 PHF12Q96QT6 1004 aa9.01□□□□□ -0.97
RBM39-220ENST00000455343 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
RBM39-220ENST00000455343 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
RBM39-220ENST00000455343 POTEIP0CG38 1075 aa8.99□□□□□ -0.97
RBM39-220ENST00000455343 TSPYL2Q9H2G4 693 aaPredicted RBP8.96□□□□□ -0.98
RBM39-220ENST00000455343 DCBLD2Q96PD2 775 aa8.95□□□□□ -0.98
RBM39-220ENST00000455343 FBXO3Q9UK99 471 aa8.95□□□□□ -0.98
RBM39-220ENST00000455343 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms