RNA–Protein interactions for RNA: ENST00000426951.5

RBM39-211, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best)

Gene RBM39, Length 840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-211ENST00000426951 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
RBM39-211ENST00000426951 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
RBM39-211ENST00000426951 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
RBM39-211ENST00000426951 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
RBM39-211ENST00000426951 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
RBM39-211ENST00000426951 FOXD1Q16676 465 aa17.74■□□□□ 0.43
RBM39-211ENST00000426951 MSH5O43196 834 aa17.2■□□□□ 0.34
RBM39-211ENST00000426951 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
RBM39-211ENST00000426951 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
RBM39-211ENST00000426951 ADRA2BP18089 450 aa16.25■□□□□ 0.19
RBM39-211ENST00000426951 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
RBM39-211ENST00000426951 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
RBM39-211ENST00000426951 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
RBM39-211ENST00000426951 KCNA4P22459 653 aa14.98□□□□□ -0.01
RBM39-211ENST00000426951 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
RBM39-211ENST00000426951 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
RBM39-211ENST00000426951 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
RBM39-211ENST00000426951 NCBP3Q53F19 620 aaKnown RBP14.73□□□□□ -0.05
RBM39-211ENST00000426951 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
RBM39-211ENST00000426951 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
RBM39-211ENST00000426951 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
RBM39-211ENST00000426951 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
RBM39-211ENST00000426951 POTEHQ6S545 545 aa14.34□□□□□ -0.11
RBM39-211ENST00000426951 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
RBM39-211ENST00000426951 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
RBM39-211ENST00000426951 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
RBM39-211ENST00000426951 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
RBM39-211ENST00000426951 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
RBM39-211ENST00000426951 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
RBM39-211ENST00000426951 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
RBM39-211ENST00000426951 ZBTB22O15209 634 aa13.78□□□□□ -0.2
RBM39-211ENST00000426951 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
RBM39-211ENST00000426951 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
RBM39-211ENST00000426951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.235e-22■■□□□ 11.8
RBM39-211ENST00000426951 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
RBM39-211ENST00000426951 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
RBM39-211ENST00000426951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
RBM39-211ENST00000426951 CAPN15O75808 1086 aa13.18□□□□□ -0.3
RBM39-211ENST00000426951 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
RBM39-211ENST00000426951 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
RBM39-211ENST00000426951 DSG3P32926 999 aa13.17□□□□□ -0.3
RBM39-211ENST00000426951 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
RBM39-211ENST00000426951 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
RBM39-211ENST00000426951 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
RBM39-211ENST00000426951 APLP2Q06481 763 aa13□□□□□ -0.33
RBM39-211ENST00000426951 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
RBM39-211ENST00000426951 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
RBM39-211ENST00000426951 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
RBM39-211ENST00000426951 ABCB7O75027 752 aa12.83□□□□□ -0.36
RBM39-211ENST00000426951 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
RBM39-211ENST00000426951 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
RBM39-211ENST00000426951 POLA2Q14181 598 aa12.68□□□□□ -0.38
RBM39-211ENST00000426951 FKBP8Q14318 412 aa12.54□□□□□ -0.4
RBM39-211ENST00000426951 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
RBM39-211ENST00000426951 FBLN2P98095 1184 aa12.49□□□□□ -0.41
RBM39-211ENST00000426951 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
RBM39-211ENST00000426951 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
RBM39-211ENST00000426951 HAX1O00165 279 aa12.31□□□□□ -0.44
RBM39-211ENST00000426951 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
RBM39-211ENST00000426951 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
RBM39-211ENST00000426951 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
RBM39-211ENST00000426951 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
RBM39-211ENST00000426951 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
RBM39-211ENST00000426951 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
RBM39-211ENST00000426951 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
RBM39-211ENST00000426951 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
RBM39-211ENST00000426951 LHX8Q68G74 356 aa12.11□□□□□ -0.47
RBM39-211ENST00000426951 PROM2Q8N271 834 aa12.09□□□□□ -0.47
RBM39-211ENST00000426951 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
RBM39-211ENST00000426951 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
RBM39-211ENST00000426951 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.497e-33■■□□□ 11.8
RBM39-211ENST00000426951 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
RBM39-211ENST00000426951 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
RBM39-211ENST00000426951 EVX2Q03828 476 aa11.95□□□□□ -0.5
RBM39-211ENST00000426951 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
RBM39-211ENST00000426951 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
RBM39-211ENST00000426951 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
RBM39-211ENST00000426951 GABBR2O75899 941 aa11.73□□□□□ -0.53
RBM39-211ENST00000426951 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
RBM39-211ENST00000426951 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
RBM39-211ENST00000426951 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
RBM39-211ENST00000426951 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
RBM39-211ENST00000426951 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
RBM39-211ENST00000426951 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
RBM39-211ENST00000426951 MIER1Q8N108 512 aa11.68□□□□□ -0.54
RBM39-211ENST00000426951 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
RBM39-211ENST00000426951 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
RBM39-211ENST00000426951 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
RBM39-211ENST00000426951 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
RBM39-211ENST00000426951 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
RBM39-211ENST00000426951 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
RBM39-211ENST00000426951 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
RBM39-211ENST00000426951 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
RBM39-211ENST00000426951 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
RBM39-211ENST00000426951 CHADLQ6NUI6 762 aa11.48□□□□□ -0.57
RBM39-211ENST00000426951 POTEMA6NI47 508 aa11.44□□□□□ -0.58
RBM39-211ENST00000426951 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
RBM39-211ENST00000426951 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
RBM39-211ENST00000426951 CLCN6P51797 869 aa11.39□□□□□ -0.59
RBM39-211ENST00000426951 PKD2Q13563 968 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms