RNA–Protein interactions for RNA: ENST00000466745.5

SFPQ-204, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-204ENST00000466745 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
SFPQ-204ENST00000466745 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
SFPQ-204ENST00000466745 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
SFPQ-204ENST00000466745 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
SFPQ-204ENST00000466745 FOXD1Q16676 465 aa16.22■□□□□ 0.19
SFPQ-204ENST00000466745 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
SFPQ-204ENST00000466745 MSH5O43196 834 aa15.2■□□□□ 0.02
SFPQ-204ENST00000466745 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
SFPQ-204ENST00000466745 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
SFPQ-204ENST00000466745 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
SFPQ-204ENST00000466745 ADRA2BP18089 450 aa15.03■□□□□ -0
SFPQ-204ENST00000466745 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
SFPQ-204ENST00000466745 KCNA4P22459 653 aa13.98□□□□□ -0.17
SFPQ-204ENST00000466745 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
SFPQ-204ENST00000466745 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
SFPQ-204ENST00000466745 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
SFPQ-204ENST00000466745 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
SFPQ-204ENST00000466745 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
SFPQ-204ENST00000466745 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
SFPQ-204ENST00000466745 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
SFPQ-204ENST00000466745 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
SFPQ-204ENST00000466745 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
SFPQ-204ENST00000466745 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
SFPQ-204ENST00000466745 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
SFPQ-204ENST00000466745 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
SFPQ-204ENST00000466745 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
SFPQ-204ENST00000466745 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
SFPQ-204ENST00000466745 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
SFPQ-204ENST00000466745 ZBTB22O15209 634 aa12.86□□□□□ -0.35
SFPQ-204ENST00000466745 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
SFPQ-204ENST00000466745 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
SFPQ-204ENST00000466745 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
SFPQ-204ENST00000466745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.394e-12■□□□□ 10
SFPQ-204ENST00000466745 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
SFPQ-204ENST00000466745 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
SFPQ-204ENST00000466745 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
SFPQ-204ENST00000466745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
SFPQ-204ENST00000466745 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
SFPQ-204ENST00000466745 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
SFPQ-204ENST00000466745 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
SFPQ-204ENST00000466745 CAPN15O75808 1086 aa12.17□□□□□ -0.46
SFPQ-204ENST00000466745 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
SFPQ-204ENST00000466745 DSG3P32926 999 aa12.11□□□□□ -0.47
SFPQ-204ENST00000466745 APLP2Q06481 763 aa12.09□□□□□ -0.47
SFPQ-204ENST00000466745 TRHP20396 242 aaPredicted RBP11.96□□□□□ -0.49
SFPQ-204ENST00000466745 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
SFPQ-204ENST00000466745 ABCB7O75027 752 aa11.91□□□□□ -0.5
SFPQ-204ENST00000466745 POTEHQ6S545 545 aa11.8□□□□□ -0.52
SFPQ-204ENST00000466745 POLA2Q14181 598 aa11.75□□□□□ -0.53
SFPQ-204ENST00000466745 FKBP8Q14318 412 aa11.74□□□□□ -0.53
SFPQ-204ENST00000466745 FBLN2P98095 1184 aa11.63□□□□□ -0.55
SFPQ-204ENST00000466745 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
SFPQ-204ENST00000466745 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
SFPQ-204ENST00000466745 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
SFPQ-204ENST00000466745 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
SFPQ-204ENST00000466745 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
SFPQ-204ENST00000466745 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
SFPQ-204ENST00000466745 PROM2Q8N271 834 aa11.3□□□□□ -0.6
SFPQ-204ENST00000466745 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
SFPQ-204ENST00000466745 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
SFPQ-204ENST00000466745 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
SFPQ-204ENST00000466745 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
SFPQ-204ENST00000466745 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
SFPQ-204ENST00000466745 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
SFPQ-204ENST00000466745 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
SFPQ-204ENST00000466745 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
SFPQ-204ENST00000466745 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
SFPQ-204ENST00000466745 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
SFPQ-204ENST00000466745 VASPP50552 380 aaPredicted RBP11.09□□□□□ -0.63
SFPQ-204ENST00000466745 RTN4Q9NQC3 1192 aaKnown RBP11.09□□□□□ -0.63
SFPQ-204ENST00000466745 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
SFPQ-204ENST00000466745 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
SFPQ-204ENST00000466745 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
SFPQ-204ENST00000466745 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
SFPQ-204ENST00000466745 NISCHQ9Y2I1 1504 aa10.97□□□□□ -0.65
SFPQ-204ENST00000466745 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
SFPQ-204ENST00000466745 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
SFPQ-204ENST00000466745 HAX1O00165 279 aa10.91□□□□□ -0.66
SFPQ-204ENST00000466745 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
SFPQ-204ENST00000466745 SPDYE1Q8NFV5 336 aaPredicted RBP10.89□□□□□ -0.67
SFPQ-204ENST00000466745 MIER1Q8N108 512 aa10.88□□□□□ -0.67
SFPQ-204ENST00000466745 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
SFPQ-204ENST00000466745 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
SFPQ-204ENST00000466745 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
SFPQ-204ENST00000466745 EVX2Q03828 476 aa10.78□□□□□ -0.68
SFPQ-204ENST00000466745 SPOCK2Q92563 424 aa10.78□□□□□ -0.68
SFPQ-204ENST00000466745 PRR29P0C7W0 189 aa10.77□□□□□ -0.69
SFPQ-204ENST00000466745 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
SFPQ-204ENST00000466745 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
SFPQ-204ENST00000466745 PKD2Q13563 968 aa10.67□□□□□ -0.7
SFPQ-204ENST00000466745 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
SFPQ-204ENST00000466745 CHADLQ6NUI6 762 aa10.66□□□□□ -0.7
SFPQ-204ENST00000466745 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
SFPQ-204ENST00000466745 CIZ1Q9ULV3 898 aaPredicted RBP10.6□□□□□ -0.71
SFPQ-204ENST00000466745 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
SFPQ-204ENST00000466745 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
SFPQ-204ENST00000466745 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
SFPQ-204ENST00000466745 NUBP1P53384 320 aa10.56□□□□□ -0.72
SFPQ-204ENST00000466745 GABBR2O75899 941 aa10.51□□□□□ -0.73
SFPQ-204ENST00000466745 NPM1P06748 294 aaKnown RBP eCLIP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms