RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.03
SFPQ-205ENST00000468598 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.28
SFPQ-205ENST00000468598 ABCC9O60706 1549 aa13.01□□□□□ -0.33
SFPQ-205ENST00000468598 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
SFPQ-205ENST00000468598 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
SFPQ-205ENST00000468598 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.41
SFPQ-205ENST00000468598 NACADO15069 1562 aa12.5□□□□□ -0.41
SFPQ-205ENST00000468598 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
SFPQ-205ENST00000468598 SHROOM4Q9ULL8 1493 aa12.47□□□□□ -0.41
SFPQ-205ENST00000468598 MYO15BQ96JP2 1530 aa12.44□□□□□ -0.42
SFPQ-205ENST00000468598 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
SFPQ-205ENST00000468598 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
SFPQ-205ENST00000468598 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.45
SFPQ-205ENST00000468598 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
SFPQ-205ENST00000468598 BICRAQ9NZM4 1560 aa12.16□□□□□ -0.46
SFPQ-205ENST00000468598 CECR2Q9BXF3 1484 aa11.97□□□□□ -0.49
SFPQ-205ENST00000468598 CHIC1Q5VXU3 224 aa11.9□□□□□ -0.5
SFPQ-205ENST00000468598 SUPT5HO00267 1087 aaKnown RBP11.87□□□□□ -0.51
SFPQ-205ENST00000468598 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
SFPQ-205ENST00000468598 HRCP23327 699 aa11.83□□□□□ -0.52
SFPQ-205ENST00000468598 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
SFPQ-205ENST00000468598 RSF1Q96T23 1441 aaPredicted RBP11.79□□□□□ -0.52
SFPQ-205ENST00000468598 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
SFPQ-205ENST00000468598 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
SFPQ-205ENST00000468598 BAZ1AQ9NRL2 1556 aaPredicted RBP11.78□□□□□ -0.52
SFPQ-205ENST00000468598 WIZO95785 1651 aa11.73□□□□□ -0.53
SFPQ-205ENST00000468598 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.53
SFPQ-205ENST00000468598 ATAD2BQ9ULI0 1458 aa11.67□□□□□ -0.54
SFPQ-205ENST00000468598 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
SFPQ-205ENST00000468598 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
SFPQ-205ENST00000468598 BAZ1BQ9UIG0 1483 aaKnown RBP11.59□□□□□ -0.55
SFPQ-205ENST00000468598 NCAPD3P42695 1498 aa11.58□□□□□ -0.56
SFPQ-205ENST00000468598 PCGF6Q9BYE7 350 aa11.53□□□□□ -0.56
SFPQ-205ENST00000468598 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.56
SFPQ-205ENST00000468598 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
SFPQ-205ENST00000468598 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
SFPQ-205ENST00000468598 PPARGC1BQ86YN6 1023 aaKnown RBP11.38□□□□□ -0.59
SFPQ-205ENST00000468598 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
SFPQ-205ENST00000468598 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
SFPQ-205ENST00000468598 NESP48681 1621 aa11.36□□□□□ -0.59
SFPQ-205ENST00000468598 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
SFPQ-205ENST00000468598 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
SFPQ-205ENST00000468598 CFTRP13569 1480 aa11.27□□□□□ -0.61
SFPQ-205ENST00000468598 LOC105371045A0A1W2PR82 267 aa11.24□□□□□ -0.61
SFPQ-205ENST00000468598 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
SFPQ-205ENST00000468598 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
SFPQ-205ENST00000468598 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
SFPQ-205ENST00000468598 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
SFPQ-205ENST00000468598 PDS5BQ9NTI5 1447 aa11.15□□□□□ -0.62
SFPQ-205ENST00000468598 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
SFPQ-205ENST00000468598 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
SFPQ-205ENST00000468598 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
SFPQ-205ENST00000468598 CEP164Q9UPV0 1460 aa11.11□□□□□ -0.63
SFPQ-205ENST00000468598 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
SFPQ-205ENST00000468598 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
SFPQ-205ENST00000468598 CUX1P39880 1505 aa11.07□□□□□ -0.64
SFPQ-205ENST00000468598 URB2Q14146 1524 aaKnown RBP11.07□□□□□ -0.64
SFPQ-205ENST00000468598 TOPBP1Q92547 1522 aa11.03□□□□□ -0.64
SFPQ-205ENST00000468598 SCAF1Q9H7N4 1312 aaKnown RBP11.02□□□□□ -0.64
SFPQ-205ENST00000468598 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
SFPQ-205ENST00000468598 FAM9AQ8IZU1 332 aaPredicted RBP11□□□□□ -0.65
SFPQ-205ENST00000468598 THOC2Q8NI27 1593 aaKnown RBP11□□□□□ -0.65
SFPQ-205ENST00000468598 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
SFPQ-205ENST00000468598 DNMBPQ6XZF7 1577 aa10.99□□□□□ -0.65
SFPQ-205ENST00000468598 FGD5Q6ZNL6 1462 aa10.98□□□□□ -0.65
SFPQ-205ENST00000468598 RAD54L2Q9Y4B4 1467 aa10.98□□□□□ -0.65
SFPQ-205ENST00000468598 POLA1P09884 1462 aaPredicted RBP10.96□□□□□ -0.65
SFPQ-205ENST00000468598 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.65
SFPQ-205ENST00000468598 MYT1Q01538 1121 aa10.96□□□□□ -0.66
SFPQ-205ENST00000468598 WDR62O43379 1518 aa10.95□□□□□ -0.66
SFPQ-205ENST00000468598 SOGA1O94964 1423 aa10.94□□□□□ -0.66
SFPQ-205ENST00000468598 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
SFPQ-205ENST00000468598 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
SFPQ-205ENST00000468598 CUX2O14529 1486 aa10.93□□□□□ -0.66
SFPQ-205ENST00000468598 TDRD9Q8NDG6 1382 aaKnown RBP10.91□□□□□ -0.66
SFPQ-205ENST00000468598 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
SFPQ-205ENST00000468598 ACIN1Q9UKV3 1341 aaKnown RBP10.89□□□□□ -0.67
SFPQ-205ENST00000468598 AQRO60306 1485 aaKnown RBP eCLIP10.87□□□□□ -0.677e-6■■□□□ 12.2
SFPQ-205ENST00000468598 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
SFPQ-205ENST00000468598 ABCA10Q8WWZ4 1543 aa10.84□□□□□ -0.67
SFPQ-205ENST00000468598 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
SFPQ-205ENST00000468598 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
SFPQ-205ENST00000468598 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
SFPQ-205ENST00000468598 PHF23Q9BUL5 403 aaPredicted RBP10.81□□□□□ -0.68
SFPQ-205ENST00000468598 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
SFPQ-205ENST00000468598 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
SFPQ-205ENST00000468598 GAPVD1Q14C86 1478 aa10.79□□□□□ -0.68
SFPQ-205ENST00000468598 IGF1RP08069 1367 aa10.79□□□□□ -0.68
SFPQ-205ENST00000468598 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
SFPQ-205ENST00000468598 CCER1Q8TC90 406 aaPredicted RBP10.78□□□□□ -0.68
SFPQ-205ENST00000468598 NEUROD1Q13562 356 aa10.77□□□□□ -0.68
SFPQ-205ENST00000468598 ABCA5Q8WWZ7 1642 aa10.76□□□□□ -0.69
SFPQ-205ENST00000468598 FBLN2P98095 1184 aa10.76□□□□□ -0.69
SFPQ-205ENST00000468598 DIEXFQ68CQ4 756 aaKnown RBP10.75□□□□□ -0.69
SFPQ-205ENST00000468598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
SFPQ-205ENST00000468598 GRIN2BQ13224 1484 aa10.72□□□□□ -0.69
SFPQ-205ENST00000468598 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
SFPQ-205ENST00000468598 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
SFPQ-205ENST00000468598 SNAPC4Q5SXM2 1469 aa10.72□□□□□ -0.69
SFPQ-205ENST00000468598 RANGAP1P46060 587 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms