Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNAB3O43448 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNAB3O43448 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNAB3O43448 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KCNAB3O43448 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNAB3O43448 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KCNAB3O43448 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNAB3O43448 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KCNAB3O43448 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNAB3O43448 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNAB3O43448 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KCNAB3O43448 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
KCNAB3O43448 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNAB3O43448 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNAB3O43448 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.83■□□□□ 0.44
KCNAB3O43448 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.83■□□□□ 0.44
KCNAB3O43448 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.83■□□□□ 0.44
KCNAB3O43448 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNAB3O43448 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNAB3O43448 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
KCNAB3O43448 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNAB3O43448 AC009102.2-201ENST00000606772 1639 ntBASIC17.83■□□□□ 0.44
KCNAB3O43448 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNAB3O43448 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KCNAB3O43448 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNAB3O43448 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
KCNAB3O43448 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNAB3O43448 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.82■□□□□ 0.44
KCNAB3O43448 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KCNAB3O43448 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNAB3O43448 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KCNAB3O43448 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.81■□□□□ 0.44
KCNAB3O43448 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNAB3O43448 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KCNAB3O43448 KRT18P5-201ENST00000436075 1291 ntBASIC17.81■□□□□ 0.44
KCNAB3O43448 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.81■□□□□ 0.44
KCNAB3O43448 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KCNAB3O43448 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNAB3O43448 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KCNAB3O43448 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNAB3O43448 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNAB3O43448 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNAB3O43448 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
KCNAB3O43448 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KCNAB3O43448 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.8■□□□□ 0.44
KCNAB3O43448 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
KCNAB3O43448 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KCNAB3O43448 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
KCNAB3O43448 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.8■□□□□ 0.44
KCNAB3O43448 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.8■□□□□ 0.44
KCNAB3O43448 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.8■□□□□ 0.44
KCNAB3O43448 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNAB3O43448 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.8■□□□□ 0.44
KCNAB3O43448 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KCNAB3O43448 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.8■□□□□ 0.44
KCNAB3O43448 CA15P2-201ENST00000611168 834 ntBASIC17.8■□□□□ 0.44
KCNAB3O43448 AC241377.3-202ENST00000626088 1088 ntBASIC17.8■□□□□ 0.44
KCNAB3O43448 AC241585.3-202ENST00000628937 1088 ntBASIC17.8■□□□□ 0.44
KCNAB3O43448 AC245100.8-202ENST00000629247 1058 ntBASIC17.8■□□□□ 0.44
KCNAB3O43448 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KCNAB3O43448 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNAB3O43448 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNAB3O43448 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNAB3O43448 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms