Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 AIRN-201ENST00000601203 4374 ntBASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.14□□□□□ -0.15
TRBV20-1A0A075B6N2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 AC004408.2-201ENST00000623613 2777 ntBASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 CAHM-201ENST00000604200 896 ntBASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRBV20-1A0A075B6N2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 LTB4R2-202ENST00000528054 3092 ntBASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 AC097358.2-201ENST00000607541 1159 ntBASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 AP000974.1-201ENST00000623909 2387 ntBASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV20-1A0A075B6N2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV20-1A0A075B6N2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 AL353803.4-201ENST00000565882 1934 ntBASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV20-1A0A075B6N2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms