Protein–RNA interactions for Protein: Q5VT52

RPRD2, Regulation of nuclear pre-mRNA domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 1,461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2Q5VT52 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RPRD2Q5VT52 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 OR10C1-204ENST00000622521 1039 ntBASIC31.27■■■□□ 2.6
RPRD2Q5VT52 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 AC092118.2-201ENST00000613495 667 ntBASIC31.27■■■□□ 2.6
RPRD2Q5VT52 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.27■■■□□ 2.6
RPRD2Q5VT52 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
RPRD2Q5VT52 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
RPRD2Q5VT52 GALC-202ENST00000393568 2054 ntTSL 2 BASIC31.26■■■□□ 2.6
RPRD2Q5VT52 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC31.26■■■□□ 2.6
RPRD2Q5VT52 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC31.26■■■□□ 2.6
RPRD2Q5VT52 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.6
RPRD2Q5VT52 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 MIR4758-201ENST00000577688 71 ntBASIC31.26■■■□□ 2.59
RPRD2Q5VT52 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RPRD2Q5VT52 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RPRD2Q5VT52 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.25■■■□□ 2.59
RPRD2Q5VT52 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
RPRD2Q5VT52 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC31.25■■■□□ 2.59
RPRD2Q5VT52 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 MKRN4P-201ENST00000444706 1521 ntBASIC31.24■■■□□ 2.59
RPRD2Q5VT52 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
RPRD2Q5VT52 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 MIPEPP3-201ENST00000412105 444 ntBASIC31.23■■■□□ 2.59
RPRD2Q5VT52 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RPRD2Q5VT52 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.22■■■□□ 2.59
RPRD2Q5VT52 PPP1R14BP2-201ENST00000426284 444 ntBASIC31.22■■■□□ 2.59
RPRD2Q5VT52 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.22■■■□□ 2.59
RPRD2Q5VT52 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC31.22■■■□□ 2.59
RPRD2Q5VT52 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RPRD2Q5VT52 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.22■■■□□ 2.59
RPRD2Q5VT52 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
RPRD2Q5VT52 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
RPRD2Q5VT52 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 AL512625.2-201ENST00000417533 625 ntBASIC31.21■■■□□ 2.59
RPRD2Q5VT52 POU5F1P3-201ENST00000428824 1078 ntBASIC31.21■■■□□ 2.59
RPRD2Q5VT52 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 ITM2C-210ENST00000620962 501 ntBASIC31.21■■■□□ 2.59
RPRD2Q5VT52 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC31.21■■■□□ 2.59
RPRD2Q5VT52 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RPRD2Q5VT52 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
RPRD2Q5VT52 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RPRD2Q5VT52 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPRD2Q5VT52 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPRD2Q5VT52 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPRD2Q5VT52 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
RPRD2Q5VT52 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
RPRD2Q5VT52 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC31.2■■■□□ 2.58
RPRD2Q5VT52 AL162412.1-201ENST00000567129 965 ntBASIC31.2■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms