Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SIX6O95475 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SIX6O95475 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SIX6O95475 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX6O95475 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX6O95475 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SIX6O95475 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SIX6O95475 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX6O95475 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX6O95475 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIX6O95475 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SIX6O95475 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX6O95475 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX6O95475 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SIX6O95475 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX6O95475 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SIX6O95475 AL049796.1-201ENST00000565336 1766 ntBASIC17.71■□□□□ 0.43
SIX6O95475 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SIX6O95475 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX6O95475 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX6O95475 AF131216.4-201ENST00000638924 1588 ntBASIC17.71■□□□□ 0.43
SIX6O95475 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX6O95475 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SIX6O95475 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX6O95475 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SIX6O95475 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX6O95475 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX6O95475 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX6O95475 AC104564.3-201ENST00000582367 638 ntBASIC17.71■□□□□ 0.43
SIX6O95475 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX6O95475 AC009086.3-201ENST00000623486 1008 ntBASIC17.71■□□□□ 0.43
SIX6O95475 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX6O95475 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX6O95475 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SIX6O95475 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX6O95475 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX6O95475 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SIX6O95475 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SIX6O95475 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SIX6O95475 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SIX6O95475 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX6O95475 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SIX6O95475 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.7■□□□□ 0.42
SIX6O95475 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX6O95475 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX6O95475 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.7■□□□□ 0.42
SIX6O95475 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SIX6O95475 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIX6O95475 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX6O95475 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX6O95475 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX6O95475 AC004687.1-201ENST00000579003 1625 ntBASIC17.69■□□□□ 0.42
SIX6O95475 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIX6O95475 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SIX6O95475 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
SIX6O95475 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SIX6O95475 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX6O95475 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX6O95475 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.69■□□□□ 0.42
SIX6O95475 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX6O95475 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX6O95475 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SIX6O95475 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
SIX6O95475 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.68■□□□□ 0.42
SIX6O95475 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIX6O95475 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms