Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01558Q9Y6Z2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 AC116562.4-201ENST00000641316 2276 ntBASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 AP005212.1-201ENST00000581547 1997 ntBASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01558Q9Y6Z2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.63
LINC01558Q9Y6Z2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
LINC01558Q9Y6Z2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.08□□□□□ -0.63
LINC01558Q9Y6Z2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01558Q9Y6Z2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01558Q9Y6Z2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 FZD10-202ENST00000539839 3282 ntBASIC11.06□□□□□ -0.64
LINC01558Q9Y6Z2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms