Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.91■□□□□ 0.94
HMGCLL1Q8TB92 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.91■□□□□ 0.94
HMGCLL1Q8TB92 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCLL1Q8TB92 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCLL1Q8TB92 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HMGCLL1Q8TB92 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLL1Q8TB92 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
HMGCLL1Q8TB92 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 AC027612.3-201ENST00000413684 1047 ntBASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGCLL1Q8TB92 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCLL1Q8TB92 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 AL034346.1-201ENST00000568244 1277 ntBASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 BX005040.4-201ENST00000637145 1518 ntBASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 AF106564.1-201ENST00000607058 2553 ntBASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 AC073130.3-201ENST00000624389 2278 ntBASIC20.87■□□□□ 0.93
HMGCLL1Q8TB92 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLL1Q8TB92 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 Z98882.1-201ENST00000622160 2253 ntBASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLL1Q8TB92 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms