Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV20-1A0A075B6N2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRBV20-1A0A075B6N2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TRBV20-1A0A075B6N2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV20-1A0A075B6N2 FZD10-202ENST00000539839 3282 ntBASIC14.21□□□□□ -0.14
TRBV20-1A0A075B6N2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV20-1A0A075B6N2 OXCT2P1-201ENST00000447263 1535 ntBASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 SETD8P1-201ENST00000623146 1180 ntBASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 AP005212.1-201ENST00000581547 1997 ntBASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV20-1A0A075B6N2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 TNXA-203ENST00000507684 2038 ntBASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 AL359258.2-201ENST00000564063 1566 ntBASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV20-1A0A075B6N2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV20-1A0A075B6N2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms