Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC6Q9Y625 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC6Q9Y625 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
GPC6Q9Y625 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
GPC6Q9Y625 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
GPC6Q9Y625 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GPC6Q9Y625 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC6Q9Y625 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
GPC6Q9Y625 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GPC6Q9Y625 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.09■□□□□ 0.81
GPC6Q9Y625 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GPC6Q9Y625 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
GPC6Q9Y625 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GPC6Q9Y625 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GPC6Q9Y625 SERBP1P1-201ENST00000396021 1160 ntBASIC20.08■□□□□ 0.81
GPC6Q9Y625 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GPC6Q9Y625 AC079089.2-201ENST00000531211 1277 ntBASIC20.08■□□□□ 0.81
GPC6Q9Y625 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.08■□□□□ 0.81
GPC6Q9Y625 AC011298.3-201ENST00000615796 283 ntBASIC20.08■□□□□ 0.81
GPC6Q9Y625 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GPC6Q9Y625 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.08■□□□□ 0.8
GPC6Q9Y625 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
GPC6Q9Y625 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GPC6Q9Y625 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
GPC6Q9Y625 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
GPC6Q9Y625 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.07■□□□□ 0.8
GPC6Q9Y625 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GPC6Q9Y625 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 AC026310.3-201ENST00000625186 2373 ntBASIC20.07■□□□□ 0.8
GPC6Q9Y625 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GPC6Q9Y625 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.07■□□□□ 0.8
GPC6Q9Y625 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC6Q9Y625 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC6Q9Y625 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 UNC93B3-201ENST00000308076 687 ntBASIC20.05■□□□□ 0.8
GPC6Q9Y625 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.05■□□□□ 0.8
GPC6Q9Y625 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GPC6Q9Y625 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.05■□□□□ 0.8
GPC6Q9Y625 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GPC6Q9Y625 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 AC244015.2-201ENST00000616358 1861 ntBASIC20.05■□□□□ 0.8
GPC6Q9Y625 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC6Q9Y625 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 OR2I1P-207ENST00000453522 948 ntBASIC20.04■□□□□ 0.8
GPC6Q9Y625 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC6Q9Y625 AC136469.2-201ENST00000623944 1028 ntBASIC20.04■□□□□ 0.8
GPC6Q9Y625 AC068587.7-201ENST00000641602 218 ntBASIC20.04■□□□□ 0.8
GPC6Q9Y625 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.04■□□□□ 0.8
GPC6Q9Y625 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms