Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 AC148477.6-201ENST00000623746 465 ntBASIC10.68□□□□□ -0.7
LINC01554Q52M75 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
LINC01554Q52M75 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC01554Q52M75 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 MST1L-201ENST00000442552 2185 ntBASIC10.67□□□□□ -0.7
LINC01554Q52M75 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 RNF166-209ENST00000567844 633 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01554Q52M75 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01554Q52M75 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 SLC6A10P-202ENST00000431994 2058 ntBASIC10.66□□□□□ -0.7
LINC01554Q52M75 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms