Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC53A6NM62 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23■■□□□ 1.27
LRRC53A6NM62 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC53A6NM62 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC53A6NM62 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23■■□□□ 1.27
LRRC53A6NM62 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
LRRC53A6NM62 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23■■□□□ 1.27
LRRC53A6NM62 AP005435.1-201ENST00000529293 1178 ntBASIC23■■□□□ 1.27
LRRC53A6NM62 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23■■□□□ 1.27
LRRC53A6NM62 SF1-220ENST00000626028 704 ntTSL 2 BASIC23■■□□□ 1.27
LRRC53A6NM62 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC53A6NM62 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23■■□□□ 1.27
LRRC53A6NM62 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRC53A6NM62 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23■■□□□ 1.27
LRRC53A6NM62 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23■■□□□ 1.27
LRRC53A6NM62 PKD1P6-201ENST00000343738 4769 ntBASIC23■■□□□ 1.27
LRRC53A6NM62 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 AC003102.1-202ENST00000563394 1796 ntBASIC22.99■■□□□ 1.27
LRRC53A6NM62 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
LRRC53A6NM62 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.99■■□□□ 1.27
LRRC53A6NM62 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 AL034346.1-201ENST00000568244 1277 ntBASIC22.99■■□□□ 1.27
LRRC53A6NM62 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
LRRC53A6NM62 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
LRRC53A6NM62 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
LRRC53A6NM62 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRC53A6NM62 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.98■■□□□ 1.27
LRRC53A6NM62 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
LRRC53A6NM62 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.98■■□□□ 1.27
LRRC53A6NM62 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.98■■□□□ 1.27
LRRC53A6NM62 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.98■■□□□ 1.27
LRRC53A6NM62 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.98■■□□□ 1.27
LRRC53A6NM62 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.98■■□□□ 1.27
LRRC53A6NM62 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRC53A6NM62 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRC53A6NM62 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LRRC53A6NM62 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LRRC53A6NM62 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC53A6NM62 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC53A6NM62 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LRRC53A6NM62 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRC53A6NM62 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRC53A6NM62 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.97■■□□□ 1.27
LRRC53A6NM62 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC53A6NM62 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
LRRC53A6NM62 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC53A6NM62 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.96■■□□□ 1.27
LRRC53A6NM62 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.96■■□□□ 1.27
LRRC53A6NM62 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC53A6NM62 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC53A6NM62 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
LRRC53A6NM62 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC53A6NM62 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRC53A6NM62 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC53A6NM62 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC53A6NM62 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC53A6NM62 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC53A6NM62 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC53A6NM62 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.95■■□□□ 1.26
LRRC53A6NM62 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC53A6NM62 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.95■■□□□ 1.26
LRRC53A6NM62 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.95■■□□□ 1.26
LRRC53A6NM62 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRC53A6NM62 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.94■■□□□ 1.26
LRRC53A6NM62 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.94■■□□□ 1.26
LRRC53A6NM62 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.94■■□□□ 1.26
LRRC53A6NM62 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.94■■□□□ 1.26
LRRC53A6NM62 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LRRC53A6NM62 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
LRRC53A6NM62 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC53A6NM62 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC53A6NM62 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.93■■□□□ 1.26
LRRC53A6NM62 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC53A6NM62 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
LRRC53A6NM62 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LRRC53A6NM62 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.93■■□□□ 1.26
LRRC53A6NM62 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.93■■□□□ 1.26
LRRC53A6NM62 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms