RNA–Protein interactions for RNA: ENST00000194530.7

STRADB-201, Transcript of STE20-related kinase adaptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRADB, Length 2,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-201ENST00000194530 NISCHQ9Y2I1 1504 aa43.26■■■■■ 4.52
STRADB-201ENST00000194530 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
STRADB-201ENST00000194530 SHROOM4Q9ULL8 1493 aa36.59■■■■□ 3.45
STRADB-201ENST00000194530 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
STRADB-201ENST00000194530 SUPT5HO00267 1087 aaKnown RBP35.92■■■■□ 3.34
STRADB-201ENST00000194530 DCAF8L2P0C7V8 631 aa35.67■■■■□ 3.3
STRADB-201ENST00000194530 DCAF1Q9Y4B6 1507 aa35.62■■■■□ 3.29
STRADB-201ENST00000194530 CHIC1Q5VXU3 224 aa35.02■■■■□ 3.2
STRADB-201ENST00000194530 MYO15BQ96JP2 1530 aa34.75■■■■□ 3.15
STRADB-201ENST00000194530 ABCC9O60706 1549 aa34.49■■■■□ 3.11
STRADB-201ENST00000194530 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
STRADB-201ENST00000194530 RSF1Q96T23 1441 aaPredicted RBP34.18■■■■□ 3.06
STRADB-201ENST00000194530 NACADO15069 1562 aa34.11■■■■□ 3.05
STRADB-201ENST00000194530 HRCP23327 699 aa33.88■■■■□ 3.01
STRADB-201ENST00000194530 LOC105371045A0A1W2PR82 267 aa33.86■■■■□ 3.01
STRADB-201ENST00000194530 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
STRADB-201ENST00000194530 PCGF6Q9BYE7 350 aa33.79■■■■□ 3
STRADB-201ENST00000194530 CECR2Q9BXF3 1484 aa33.63■■■□□ 2.97
STRADB-201ENST00000194530 TRIM41Q8WV44 630 aa33.58■■■□□ 2.97
STRADB-201ENST00000194530 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
STRADB-201ENST00000194530 WIZO95785 1651 aa33.35■■■□□ 2.93
STRADB-201ENST00000194530 TRIM26Q12899 539 aaPredicted RBP33.32■■■□□ 2.93
STRADB-201ENST00000194530 BAZ1AQ9NRL2 1556 aaPredicted RBP33.25■■■□□ 2.91
STRADB-201ENST00000194530 FAM9AQ8IZU1 332 aaPredicted RBP33.14■■■□□ 2.9
STRADB-201ENST00000194530 PPARGC1BQ86YN6 1023 aaKnown RBP32.98■■■□□ 2.87
STRADB-201ENST00000194530 EIF4G1Q04637 1599 aaKnown RBP32.93■■■□□ 2.86
STRADB-201ENST00000194530 SMARCA4P51532 1647 aa32.93■■■□□ 2.86
STRADB-201ENST00000194530 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
STRADB-201ENST00000194530 UNC13AQ9UPW8 1703 aa32.91■■■□□ 2.86
STRADB-201ENST00000194530 CCDC88BA6NC98 1476 aa32.74■■■□□ 2.83
STRADB-201ENST00000194530 EHMT2Q96KQ7 1210 aa32.74■■■□□ 2.83
STRADB-201ENST00000194530 SMARCA2P51531 1590 aa32.7■■■□□ 2.83
STRADB-201ENST00000194530 ZEB1P37275 1124 aaPredicted RBP32.68■■■□□ 2.82
STRADB-201ENST00000194530 ABCC8Q09428 1581 aa32.53■■■□□ 2.8
STRADB-201ENST00000194530 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
STRADB-201ENST00000194530 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
STRADB-201ENST00000194530 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
STRADB-201ENST00000194530 EEA1Q15075 1411 aa32.31■■■□□ 2.76
STRADB-201ENST00000194530 SOGA1O94964 1423 aa32.26■■■□□ 2.75
STRADB-201ENST00000194530 WRNQ14191 1432 aaPredicted RBP eCLIP32.2■■■□□ 2.75
STRADB-201ENST00000194530 TNIKQ9UKE5 1360 aa32.19■■■□□ 2.74
STRADB-201ENST00000194530 CSRNP3Q8WYN3 585 aa32.17■■■□□ 2.74
STRADB-201ENST00000194530 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
STRADB-201ENST00000194530 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
STRADB-201ENST00000194530 RUSC2Q8N2Y8 1516 aa32.06■■■□□ 2.72
STRADB-201ENST00000194530 BAZ1BQ9UIG0 1483 aaKnown RBP32.01■■■□□ 2.71
STRADB-201ENST00000194530 GOLGA3Q08378 1498 aa31.99■■■□□ 2.71
STRADB-201ENST00000194530 UBTFP17480 764 aaKnown RBP31.98■■■□□ 2.71
STRADB-201ENST00000194530 SYNJ1O43426 1573 aa31.9■■■□□ 2.7
STRADB-201ENST00000194530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.84■■■□□ 2.69
STRADB-201ENST00000194530 CCER1Q8TC90 406 aaPredicted RBP31.84■■■□□ 2.69
STRADB-201ENST00000194530 CEP164Q9UPV0 1460 aa31.83■■■□□ 2.69
STRADB-201ENST00000194530 KIF21BO75037 1637 aa31.79■■■□□ 2.68
STRADB-201ENST00000194530 TTBK1Q5TCY1 1321 aaPredicted RBP31.69■■■□□ 2.66
STRADB-201ENST00000194530 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
STRADB-201ENST00000194530 CLIP1P30622 1438 aa31.58■■■□□ 2.65
STRADB-201ENST00000194530 NCAPD3P42695 1498 aa31.54■■■□□ 2.64
STRADB-201ENST00000194530 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
STRADB-201ENST00000194530 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
STRADB-201ENST00000194530 RAPGEF2Q9Y4G8 1499 aa31.49■■■□□ 2.63
STRADB-201ENST00000194530 VPS8Q8N3P4 1428 aa31.47■■■□□ 2.63
STRADB-201ENST00000194530 APLP2Q06481 763 aa31.33■■■□□ 2.61
STRADB-201ENST00000194530 ERICH3Q5RHP9 1530 aa31.32■■■□□ 2.6
STRADB-201ENST00000194530 PRXQ9BXM0 1461 aa31.29■■■□□ 2.6
STRADB-201ENST00000194530 CUX1P39880 1505 aa31.25■■■□□ 2.59
STRADB-201ENST00000194530 CFTRP13569 1480 aa31.25■■■□□ 2.59
STRADB-201ENST00000194530 DIEXFQ68CQ4 756 aaKnown RBP31.2■■■□□ 2.59
STRADB-201ENST00000194530 HNRNPUL2Q1KMD3 747 aaKnown RBP31.17■■■□□ 2.58
STRADB-201ENST00000194530 KIF27Q86VH2 1401 aa31.17■■■□□ 2.58
STRADB-201ENST00000194530 RANGAP1P46060 587 aaPredicted RBP31.17■■■□□ 2.58
STRADB-201ENST00000194530 SCAF1Q9H7N4 1312 aaKnown RBP31.07■■■□□ 2.56
STRADB-201ENST00000194530 ARAP1Q96P48 1450 aa31.06■■■□□ 2.56
STRADB-201ENST00000194530 ZNF316A6NFI3 1004 aaPredicted RBP31.04■■■□□ 2.56
STRADB-201ENST00000194530 PRDM2Q13029 1718 aa31.01■■■□□ 2.55
STRADB-201ENST00000194530 ACIN1Q9UKV3 1341 aaKnown RBP30.92■■■□□ 2.54
STRADB-201ENST00000194530 CADPSQ9ULU8 1353 aa30.91■■■□□ 2.54
STRADB-201ENST00000194530 CENPBP07199 599 aaPredicted RBP30.83■■■□□ 2.53
STRADB-201ENST00000194530 KANK4Q5T7N3 995 aaPredicted RBP30.83■■■□□ 2.53
STRADB-201ENST00000194530 CUX2O14529 1486 aa30.81■■■□□ 2.52
STRADB-201ENST00000194530 IGF1RP08069 1367 aa30.81■■■□□ 2.52
STRADB-201ENST00000194530 ARHGAP35Q9NRY4 1499 aa30.81■■■□□ 2.52
STRADB-201ENST00000194530 NEUROD1Q13562 356 aa30.79■■■□□ 2.52
STRADB-201ENST00000194530 CLSPNQ9HAW4 1339 aa30.78■■■□□ 2.52
STRADB-201ENST00000194530 RRBP1Q9P2E9 1410 aaKnown RBP30.74■■■□□ 2.51
STRADB-201ENST00000194530 FGD5Q6ZNL6 1462 aa30.7■■■□□ 2.51
STRADB-201ENST00000194530 CARMIL1Q5VZK9 1371 aa30.68■■■□□ 2.5
STRADB-201ENST00000194530 CC2D2AQ9P2K1 1620 aa30.66■■■□□ 2.5
STRADB-201ENST00000194530 DHX57Q6P158 1386 aaKnown RBP30.66■■■□□ 2.5
STRADB-201ENST00000194530 CCNB3Q8WWL7 1395 aa30.59■■■□□ 2.49
STRADB-201ENST00000194530 PELP1Q8IZL8 1130 aaKnown RBP30.58■■■□□ 2.49
STRADB-201ENST00000194530 MAP3K1Q13233 1512 aa30.58■■■□□ 2.49
STRADB-201ENST00000194530 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
STRADB-201ENST00000194530 TIAM1Q13009 1591 aa30.49■■■□□ 2.47
STRADB-201ENST00000194530 MIER1Q8N108 512 aa30.49■■■□□ 2.47
STRADB-201ENST00000194530 GTF3C3Q9Y5Q9 886 aa30.48■■■□□ 2.47
STRADB-201ENST00000194530 DNMBPQ6XZF7 1577 aa30.47■■■□□ 2.47
STRADB-201ENST00000194530 FHAD1B1AJZ9 1412 aa30.43■■■□□ 2.46
STRADB-201ENST00000194530 ABCA10Q8WWZ4 1543 aa30.41■■■□□ 2.46
STRADB-201ENST00000194530 LRRC9Q6ZRR7 1453 aa30.38■■■□□ 2.45
STRADB-201ENST00000194530 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms