Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH13P55290 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH13P55290 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.98■□□□□ 0.95
CDH13P55290 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.98■□□□□ 0.95
CDH13P55290 AC092171.4-201ENST00000609130 632 ntBASIC20.98■□□□□ 0.95
CDH13P55290 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH13P55290 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH13P55290 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH13P55290 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH13P55290 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH13P55290 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH13P55290 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH13P55290 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH13P55290 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.97■□□□□ 0.95
CDH13P55290 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH13P55290 MIR4466-201ENST00000606121 54 ntBASIC20.97■□□□□ 0.95
CDH13P55290 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH13P55290 AC068587.7-201ENST00000641602 218 ntBASIC20.97■□□□□ 0.95
CDH13P55290 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH13P55290 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CDH13P55290 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.97■□□□□ 0.95
CDH13P55290 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH13P55290 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH13P55290 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 SERBP1P1-201ENST00000396021 1160 ntBASIC20.96■□□□□ 0.95
CDH13P55290 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.96■□□□□ 0.95
CDH13P55290 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH13P55290 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CDH13P55290 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH13P55290 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH13P55290 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDH13P55290 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDH13P55290 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH13P55290 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH13P55290 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH13P55290 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH13P55290 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH13P55290 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH13P55290 AF106564.1-201ENST00000607058 2553 ntBASIC20.95■□□□□ 0.94
CDH13P55290 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDH13P55290 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH13P55290 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH13P55290 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH13P55290 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH13P55290 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDH13P55290 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH13P55290 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH13P55290 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDH13P55290 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH13P55290 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH13P55290 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.94■□□□□ 0.94
CDH13P55290 AC010141.3-201ENST00000456659 717 ntBASIC20.94■□□□□ 0.94
CDH13P55290 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH13P55290 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH13P55290 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH13P55290 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH13P55290 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDH13P55290 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH13P55290 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDH13P55290 SYT6-210ENST00000641643 1587 ntBASIC20.93■□□□□ 0.94
CDH13P55290 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH13P55290 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.93■□□□□ 0.94
CDH13P55290 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH13P55290 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH13P55290 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CDH13P55290 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH13P55290 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH13P55290 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH13P55290 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH13P55290 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH13P55290 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH13P55290 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDH13P55290 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH13P55290 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH13P55290 AC087239.1-201ENST00000622671 572 ntBASIC20.92■□□□□ 0.94
CDH13P55290 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH13P55290 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH13P55290 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.92■□□□□ 0.94
CDH13P55290 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH13P55290 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDH13P55290 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDH13P55290 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH13P55290 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH13P55290 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH13P55290 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.9■□□□□ 0.94
CDH13P55290 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH13P55290 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms