Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TRAV6A0A075B6T7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV6A0A075B6T7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 AC087289.5-201ENST00000586076 3175 ntBASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 RPS2P7-201ENST00000447334 885 ntBASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV6A0A075B6T7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV6A0A075B6T7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV6A0A075B6T7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV6A0A075B6T7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV6A0A075B6T7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV6A0A075B6T7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV6A0A075B6T7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms