Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.043e-13■□□□□ 9.7
DDX52Q9Y2R4 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.065e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC14.47□□□□□ -0.093e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC14.42□□□□□ -0.13e-13■□□□□ 9.7
DDX52Q9Y2R4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.37□□□□□ -0.115e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-217ENST00000549988 544 ntTSL 314.33□□□□□ -0.123e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC13.34□□□□□ -0.273e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC13.21□□□□□ -0.33e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-215ENST00000549479 573 ntTSL 212.86□□□□□ -0.353e-13■□□□□ 9.7
DDX52Q9Y2R4 RTN4-211ENST00000438462 656 ntTSL 512.8□□□□□ -0.365e-6■□□□□ 9.7
DDX52Q9Y2R4 UBE2J2-212ENST00000467339 515 ntTSL 212.55□□□□□ -0.45e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC12.06□□□□□ -0.483e-13■□□□□ 9.7
DDX52Q9Y2R4 SPTLC1-206ENST00000482632 837 ntTSL 511.81□□□□□ -0.525e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-209ENST00000547704 760 ntTSL 511.72□□□□□ -0.533e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-221ENST00000551600 786 ntTSL 511.72□□□□□ -0.533e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC11.63□□□□□ -0.553e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-207ENST00000547479 623 ntTSL 511.5□□□□□ -0.573e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC11.23□□□□□ -0.613e-13■□□□□ 9.7
DDX52Q9Y2R4 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.635e-6■□□□□ 9.7
DDX52Q9Y2R4 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.735e-6■□□□□ 9.7
DDX52Q9Y2R4 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.26□□□□□ -0.935e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.373e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-219ENST00000551500 552 ntTSL 1 (best)6.25□□□□□ -1.413e-13■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.7□□□□□ -1.53e-13■□□□□ 9.7
DDX52Q9Y2R4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.35□□□□□ -1.715e-6■□□□□ 9.7
DDX52Q9Y2R4 NAP1L1-218ENST00000550934 851 ntTSL 54.27□□□□□ -1.733e-13■□□□□ 9.7
DDX52Q9Y2R4 CLOCK-206ENST00000506923 616 ntTSL 33.88□□□□□ -1.795e-6■□□□□ 9.7
DDX52Q9Y2R4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.416e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-212ENST00000495265 2843 ntTSL 219.57■□□□□ 0.726e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-201ENST00000466684 1417 ntTSL 219.25■□□□□ 0.676e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-208ENST00000489816 3170 ntTSL 1 (best)17.84■□□□□ 0.456e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-218ENST00000519838 396 ntTSL 216.58■□□□□ 0.246e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC14.87□□□□□ -0.036e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-213ENST00000495794 4865 ntTSL 214.7□□□□□ -0.066e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-203ENST00000475706 744 ntTSL 1 (best)13.75□□□□□ -0.216e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-209ENST00000490814 3477 ntTSL 1 (best)11.12□□□□□ -0.636e-12■□□□□ 9.7
DDX52Q9Y2R4 BRD9-211ENST00000494422 449 ntTSL 37.55□□□□□ -1.26e-12■□□□□ 9.7
DDX52Q9Y2R4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.942e-6■□□□□ 9.6
DDX52Q9Y2R4 PRSS21-208ENST00000575199 679 ntTSL 225.37■■□□□ 1.652e-6■□□□□ 9.6
DDX52Q9Y2R4 PRSS21-207ENST00000574813 873 ntTSL 322.38■■□□□ 1.172e-6■□□□□ 9.6
DDX52Q9Y2R4 PRSS21-210ENST00000577043 814 ntTSL 522.24■■□□□ 1.152e-6■□□□□ 9.6
DDX52Q9Y2R4 PRSS21-203ENST00000570594 809 ntTSL 321.7■■□□□ 1.062e-6■□□□□ 9.6
DDX52Q9Y2R4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.53■□□□□ 0.882e-6■□□□□ 9.6
DDX52Q9Y2R4 PRSS21-204ENST00000570629 626 ntTSL 214.77□□□□□ -0.052e-6■□□□□ 9.6
DDX52Q9Y2R4 AC004687.1-201ENST00000579003 1625 ntBASIC26.16■■□□□ 1.782e-15■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-225ENST00000570092 674 ntTSL 329.54■■■□□ 2.322e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-204ENST00000561983 1044 ntTSL 529.03■■■□□ 2.242e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-209ENST00000563134 736 ntTSL 228.52■■■□□ 2.162e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-207ENST00000562708 672 ntTSL 527.27■■□□□ 1.962e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-214ENST00000566214 683 ntTSL 527.27■■□□□ 1.962e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-216ENST00000567017 1094 ntTSL 527.13■■□□□ 1.932e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-219ENST00000568950 1343 ntTSL 526.58■■□□□ 1.852e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-226ENST00000570280 708 ntTSL 324.58■■□□□ 1.532e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-205ENST00000562333 1052 ntTSL 523.38■■□□□ 1.332e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-210ENST00000563637 993 ntTSL 523.28■■□□□ 1.322e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.092e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-211ENST00000563776 923 ntTSL 321.43■■□□□ 1.022e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-215ENST00000566965 879 ntTSL 520.81■□□□□ 0.922e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-222ENST00000569675 2559 ntTSL 220.71■□□□□ 0.912e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-206ENST00000562598 612 ntTSL 319.49■□□□□ 0.712e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-218ENST00000568636 3098 ntTSL 218.53■□□□□ 0.562e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-224ENST00000569943 635 ntTSL 317.97■□□□□ 0.472e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-227ENST00000602564 3695 ntTSL 516.74■□□□□ 0.272e-9■□□□□ 9.6
DDX52Q9Y2R4 RHOT2-203ENST00000561929 625 ntTSL 216.04■□□□□ 0.162e-9■□□□□ 9.6
DDX52Q9Y2R4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.51■■□□□ 1.675e-7■□□□□ 9.5
DDX52Q9Y2R4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.465e-7■□□□□ 9.5
DDX52Q9Y2R4 KLF3-202ENST00000482150 517 ntTSL 216.98■□□□□ 0.315e-7■□□□□ 9.5
DDX52Q9Y2R4 IER3-202ENST00000376377 1350 ntBASIC21.74■■□□□ 1.074e-7■□□□□ 9.5
DDX52Q9Y2R4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.344e-7■□□□□ 9.5
DDX52Q9Y2R4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.05■■□□□ 1.124e-15■□□□□ 9.5
DDX52Q9Y2R4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.64■□□□□ 0.579e-7■□□□□ 9.5
DDX52Q9Y2R4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.569e-7■□□□□ 9.5
DDX52Q9Y2R4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.519e-7■□□□□ 9.5
DDX52Q9Y2R4 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.119e-7■□□□□ 9.5
DDX52Q9Y2R4 STMN1-207ENST00000465604 2947 ntTSL 1 (best)4.16□□□□□ -1.749e-7■□□□□ 9.5
DDX52Q9Y2R4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.97■■□□□ 1.278e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-221ENST00000513121 573 ntTSL 222.77■■□□□ 1.248e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-208ENST00000504045 1530 ntTSL 520.11■□□□□ 0.818e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-220ENST00000512876 575 ntTSL 320■□□□□ 0.798e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-222ENST00000513678 444 ntTSL 220■□□□□ 0.798e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-235ENST00000506147 580 ntTSL 418.76■□□□□ 0.598e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-239ENST00000514694 587 ntTSL 418.37■□□□□ 0.538e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-238ENST00000512107 579 ntTSL 417.36■□□□□ 0.378e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-236ENST00000509644 750 ntTSL 315.41■□□□□ 0.068e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC15.02■□□□□ -08e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-234ENST00000505016 664 ntTSL 214.51□□□□□ -0.098e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-231ENST00000502394 589 ntTSL 414.42□□□□□ -0.18e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.178e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.428e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.868e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.918e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC9.22□□□□□ -0.938e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.91□□□□□ -1.148e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.72□□□□□ -1.338e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.42□□□□□ -1.388e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-212ENST00000507860 571 ntTSL 46.28□□□□□ -1.48e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-218ENST00000511978 573 ntTSL 35.9□□□□□ -1.468e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-216ENST00000511249 447 ntTSL 45□□□□□ -1.618e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-214ENST00000509918 377 ntTSL 44.89□□□□□ -1.638e-12■□□□□ 9.4
DDX52Q9Y2R4 MATR3-209ENST00000504311 423 ntTSL 34.69□□□□□ -1.668e-12■□□□□ 9.4
Retrieved 100 of 4,483 protein–RNA pairs in 122.2 ms