Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 LMBR1-208ENST00000434278 678 ntTSL 515.75■□□□□ 0.119e-7■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-212ENST00000497830 2227 ntTSL 1 (best)17.31■□□□□ 0.362e-6■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-211ENST00000495767 1860 ntTSL 216.83■□□□□ 0.282e-6■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.25■□□□□ 0.192e-6■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.08■□□□□ 0.172e-6■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.122e-6■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-213ENST00000497959 2874 ntTSL 27.12□□□□□ -1.272e-6■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.17□□□□□ -1.422e-6■■■■□ 25.8
EXOSC5Q9NQT4 MCCC1-202ENST00000464601 759 ntTSL 23.31□□□□□ -1.882e-6■■■■□ 25.8
EXOSC5Q9NQT4 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.752e-6■■■■□ 25.7
EXOSC5Q9NQT4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.438e-7■■■■□ 25.7
EXOSC5Q9NQT4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.721e-6■■■■□ 25.7
EXOSC5Q9NQT4 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.088e-7■■■■□ 25.7
EXOSC5Q9NQT4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.25□□□□□ -0.297e-7■■■■□ 25.7
EXOSC5Q9NQT4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.32□□□□□ -0.447e-7■■■■□ 25.7
EXOSC5Q9NQT4 NSL1-202ENST00000366977 2317 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.887e-7■■■■□ 25.7
EXOSC5Q9NQT4 NSL1-206ENST00000626725 790 ntTSL 2 BASIC9.05□□□□□ -0.967e-7■■■■□ 25.7
EXOSC5Q9NQT4 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.956e-7■■■■□ 25.6
EXOSC5Q9NQT4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.68■□□□□ 0.589e-7■■■■□ 25.6
EXOSC5Q9NQT4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.48□□□□□ -0.099e-7■■■■□ 25.6
EXOSC5Q9NQT4 PIKFYVE-206ENST00000443896 3282 ntTSL 1 (best)14.17□□□□□ -0.149e-7■■■■□ 25.6
EXOSC5Q9NQT4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.95□□□□□ -0.349e-7■■■■□ 25.6
EXOSC5Q9NQT4 PIKFYVE-207ENST00000452564 4214 ntTSL 25.35□□□□□ -1.559e-7■■■■□ 25.6
EXOSC5Q9NQT4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.799e-7■■■■□ 25.6
EXOSC5Q9NQT4 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.63□□□□□ -1.199e-7■■■■□ 25.6
EXOSC5Q9NQT4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.092e-7■■■■□ 25.6
EXOSC5Q9NQT4 NCOA1-211ENST00000496333 501 ntTSL 313.36□□□□□ -0.272e-7■■■■□ 25.6
EXOSC5Q9NQT4 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.012e-7■■■■□ 25.6
EXOSC5Q9NQT4 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.52□□□□□ -1.055e-7■■■■□ 25.6
EXOSC5Q9NQT4 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.15e-7■■■■□ 25.6
EXOSC5Q9NQT4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.26□□□□□ -0.451e-7■■■■□ 25.6
EXOSC5Q9NQT4 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.581e-7■■■■□ 25.6
EXOSC5Q9NQT4 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.591e-7■■■■□ 25.6
EXOSC5Q9NQT4 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC10.07□□□□□ -0.81e-7■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.138e-8■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.2□□□□□ -0.468e-8■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-215ENST00000531849 5084 ntTSL 211.73□□□□□ -0.538e-8■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-213ENST00000530562 2339 ntTSL 210.9□□□□□ -0.668e-8■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC10.89□□□□□ -0.678e-8■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-214ENST00000531449 1588 ntTSL 1 (best)9.98□□□□□ -0.818e-8■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-209ENST00000528819 412 ntTSL 1 (best)6.33□□□□□ -1.48e-8■■■■□ 25.6
EXOSC5Q9NQT4 XRRA1-211ENST00000529926 542 ntTSL 23.74□□□□□ -1.818e-8■■■■□ 25.6
EXOSC5Q9NQT4 ZNF100-205ENST00000598026 588 ntTSL 410.77□□□□□ -0.698e-10■■■■□ 25.6
EXOSC5Q9NQT4 ZNF100-204ENST00000596452 464 ntTSL 37.04□□□□□ -1.288e-10■■■■□ 25.6
EXOSC5Q9NQT4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.28□□□□□ -0.443e-7■■■■□ 25.6
EXOSC5Q9NQT4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.28□□□□□ -0.443e-7■■■■□ 25.6
EXOSC5Q9NQT4 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.7□□□□□ -0.543e-7■■■■□ 25.6
EXOSC5Q9NQT4 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.47□□□□□ -0.573e-7■■■■□ 25.6
EXOSC5Q9NQT4 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.723e-7■■■■□ 25.6
EXOSC5Q9NQT4 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.763e-7■■■■□ 25.6
EXOSC5Q9NQT4 ZFYVE27-203ENST00000359980 2997 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.773e-7■■■■□ 25.6
EXOSC5Q9NQT4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.236e-7■■■■□ 25.6
EXOSC5Q9NQT4 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.74□□□□□ -0.536e-7■■■■□ 25.6
EXOSC5Q9NQT4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.081e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-207ENST00000550169 570 ntTSL 313.95□□□□□ -0.181e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-202ENST00000547219 611 ntTSL 513.95□□□□□ -0.181e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-204ENST00000548154 597 ntTSL 211.87□□□□□ -0.511e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-208ENST00000550316 545 ntTSL 511.31□□□□□ -0.61e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-203ENST00000547414 521 ntTSL 511.3□□□□□ -0.61e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-210ENST00000550937 781 ntTSL 511.3□□□□□ -0.61e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-205ENST00000549092 584 ntTSL 411.26□□□□□ -0.611e-6■■■■□ 25.5
EXOSC5Q9NQT4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.451e-6■■■■□ 25.5
EXOSC5Q9NQT4 ETNK1-205ENST00000544191 500 ntTSL 23.65□□□□□ -1.837e-11■■■■□ 25.5
EXOSC5Q9NQT4 CTDSPL2-203ENST00000558791 591 ntTSL 48.66□□□□□ -1.026e-7■■■■□ 25.5
EXOSC5Q9NQT4 CTDSPL2-205ENST00000558968 583 ntTSL 58.06□□□□□ -1.126e-7■■■■□ 25.5
EXOSC5Q9NQT4 CTDSPL2-208ENST00000559793 575 ntTSL 56.51□□□□□ -1.376e-7■■■■□ 25.5
EXOSC5Q9NQT4 CTDSPL2-210ENST00000560834 571 ntTSL 45.81□□□□□ -1.486e-7■■■■□ 25.5
EXOSC5Q9NQT4 TBL1XR1-222ENST00000631253 4186 ntTSL 52.21□□□□□ -2.066e-7■■■■□ 25.5
EXOSC5Q9NQT4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.041e-6■■■■□ 25.5
EXOSC5Q9NQT4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.021e-6■■■■□ 25.5
EXOSC5Q9NQT4 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.561e-6■■■■□ 25.5
EXOSC5Q9NQT4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.091e-6■■■■□ 25.4
EXOSC5Q9NQT4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.421e-6■■■■□ 25.4
EXOSC5Q9NQT4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.352e-6■■■■□ 25.4
EXOSC5Q9NQT4 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.55□□□□□ -1.042e-6■■■■□ 25.4
EXOSC5Q9NQT4 SLMAP-214ENST00000467901 2698 ntTSL 26.35□□□□□ -1.392e-6■■■■□ 25.4
EXOSC5Q9NQT4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.472e-6■■■■□ 25.4
EXOSC5Q9NQT4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.68□□□□□ -1.662e-6■■■■□ 25.4
EXOSC5Q9NQT4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.17□□□□□ -1.742e-6■■■■□ 25.4
EXOSC5Q9NQT4 TBC1D5-213ENST00000434420 386 ntTSL 43.4□□□□□ -1.872e-6■■■■□ 25.4
EXOSC5Q9NQT4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.565e-8■■■■□ 25.4
EXOSC5Q9NQT4 TRIM44-202ENST00000532066 637 ntTSL 46.89□□□□□ -1.312e-7■■■■□ 25.4
EXOSC5Q9NQT4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.72□□□□□ -1.652e-6■■■■□ 25.4
EXOSC5Q9NQT4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.72e-6■■■■□ 25.4
EXOSC5Q9NQT4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.29□□□□□ -1.882e-6■■■■□ 25.4
EXOSC5Q9NQT4 PHKB-214ENST00000567402 1617 ntTSL 1 (best)9.07□□□□□ -0.969e-7■■■■□ 25.4
EXOSC5Q9NQT4 SMYD3-216ENST00000492487 634 ntTSL 36.92□□□□□ -1.31e-6■■■■□ 25.4
EXOSC5Q9NQT4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.051e-7■■■■□ 25.4
EXOSC5Q9NQT4 GNAQ-202ENST00000411677 551 ntTSL 38.75□□□□□ -1.011e-7■■■■□ 25.4
EXOSC5Q9NQT4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.072e-6■■■■□ 25.4
EXOSC5Q9NQT4 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.742e-6■■■■□ 25.4
EXOSC5Q9NQT4 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC9.1□□□□□ -0.952e-6■■■■□ 25.4
EXOSC5Q9NQT4 PLCB1-220ENST00000630757 857 ntTSL 36.06□□□□□ -1.445e-7■■■■□ 25.4
EXOSC5Q9NQT4 PLCB1-229ENST00000637204 100 ntTSL 52.35□□□□□ -2.035e-7■■■■□ 25.4
EXOSC5Q9NQT4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.719e-7■■■■□ 25.4
EXOSC5Q9NQT4 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC10.54□□□□□ -0.729e-7■■■■□ 25.4
EXOSC5Q9NQT4 VDAC2-201ENST00000298468 931 ntTSL 55.67□□□□□ -1.59e-7■■■■□ 25.4
EXOSC5Q9NQT4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.549e-7■■■■□ 25.4
EXOSC5Q9NQT4 DDX10-201ENST00000322536 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.898e-7■■■■□ 25.4
EXOSC5Q9NQT4 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC8.93□□□□□ -0.988e-7■■■■□ 25.4
Retrieved 100 of 8,799 protein–RNA pairs in 213.3 ms