RNA–Protein interactions for RNA: ENST00000528819.1

XRRA1-209, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 1 (best)

Gene XRRA1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-209ENST00000528819 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
XRRA1-209ENST00000528819 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
XRRA1-209ENST00000528819 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
XRRA1-209ENST00000528819 CCDC180Q9P1Z9 1646 aa16.31■□□□□ 0.2
XRRA1-209ENST00000528819 ABCC9O60706 1549 aa15.99■□□□□ 0.15
XRRA1-209ENST00000528819 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
XRRA1-209ENST00000528819 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
XRRA1-209ENST00000528819 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
XRRA1-209ENST00000528819 NACADO15069 1562 aa15.34■□□□□ 0.05
XRRA1-209ENST00000528819 DCAF1Q9Y4B6 1507 aa15.23■□□□□ 0.03
XRRA1-209ENST00000528819 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
XRRA1-209ENST00000528819 SCRIBQ14160 1630 aa15.03■□□□□ -0
XRRA1-209ENST00000528819 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
XRRA1-209ENST00000528819 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
XRRA1-209ENST00000528819 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
XRRA1-209ENST00000528819 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
XRRA1-209ENST00000528819 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
XRRA1-209ENST00000528819 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
XRRA1-209ENST00000528819 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
XRRA1-209ENST00000528819 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
XRRA1-209ENST00000528819 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
XRRA1-209ENST00000528819 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
XRRA1-209ENST00000528819 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
XRRA1-209ENST00000528819 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
XRRA1-209ENST00000528819 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
XRRA1-209ENST00000528819 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
XRRA1-209ENST00000528819 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
XRRA1-209ENST00000528819 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
XRRA1-209ENST00000528819 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
XRRA1-209ENST00000528819 WIZO95785 1651 aa14.16□□□□□ -0.14
XRRA1-209ENST00000528819 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
XRRA1-209ENST00000528819 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
XRRA1-209ENST00000528819 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
XRRA1-209ENST00000528819 HMGXB3Q12766 1538 aa14.08□□□□□ -0.16
XRRA1-209ENST00000528819 TOP2AP11388 1531 aaKnown RBP13.98□□□□□ -0.17
XRRA1-209ENST00000528819 NESP48681 1621 aa13.86□□□□□ -0.19
XRRA1-209ENST00000528819 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
XRRA1-209ENST00000528819 FOXD1Q16676 465 aa13.8□□□□□ -0.2
XRRA1-209ENST00000528819 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
XRRA1-209ENST00000528819 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
XRRA1-209ENST00000528819 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
XRRA1-209ENST00000528819 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
XRRA1-209ENST00000528819 CFTRP13569 1480 aa13.71□□□□□ -0.21
XRRA1-209ENST00000528819 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
XRRA1-209ENST00000528819 KIF21AQ7Z4S6 1674 aa13.64□□□□□ -0.23
XRRA1-209ENST00000528819 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
XRRA1-209ENST00000528819 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
XRRA1-209ENST00000528819 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
XRRA1-209ENST00000528819 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
XRRA1-209ENST00000528819 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
XRRA1-209ENST00000528819 CUX2O14529 1486 aa13.48□□□□□ -0.25
XRRA1-209ENST00000528819 WDR62O43379 1518 aa13.47□□□□□ -0.25
XRRA1-209ENST00000528819 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
XRRA1-209ENST00000528819 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
XRRA1-209ENST00000528819 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
XRRA1-209ENST00000528819 CUX1P39880 1505 aa13.39□□□□□ -0.27
XRRA1-209ENST00000528819 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
XRRA1-209ENST00000528819 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
XRRA1-209ENST00000528819 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
XRRA1-209ENST00000528819 RAD54L2Q9Y4B4 1467 aa13.33□□□□□ -0.28
XRRA1-209ENST00000528819 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
XRRA1-209ENST00000528819 SOGA1O94964 1423 aa13.32□□□□□ -0.28
XRRA1-209ENST00000528819 IFT140Q96RY7 1462 aa13.32□□□□□ -0.28
XRRA1-209ENST00000528819 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
XRRA1-209ENST00000528819 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
XRRA1-209ENST00000528819 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
XRRA1-209ENST00000528819 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
XRRA1-209ENST00000528819 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
XRRA1-209ENST00000528819 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
XRRA1-209ENST00000528819 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
XRRA1-209ENST00000528819 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
XRRA1-209ENST00000528819 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
XRRA1-209ENST00000528819 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
XRRA1-209ENST00000528819 FBLN2P98095 1184 aa13.16□□□□□ -0.3
XRRA1-209ENST00000528819 GAPVD1Q14C86 1478 aa13.15□□□□□ -0.3
XRRA1-209ENST00000528819 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
XRRA1-209ENST00000528819 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
XRRA1-209ENST00000528819 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
XRRA1-209ENST00000528819 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
XRRA1-209ENST00000528819 KIF27Q86VH2 1401 aa13.1□□□□□ -0.31
XRRA1-209ENST00000528819 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
XRRA1-209ENST00000528819 PBRM1Q86U86 1689 aa13.08□□□□□ -0.32
XRRA1-209ENST00000528819 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
XRRA1-209ENST00000528819 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
XRRA1-209ENST00000528819 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
XRRA1-209ENST00000528819 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
XRRA1-209ENST00000528819 IGF1RP08069 1367 aa13.01□□□□□ -0.33
XRRA1-209ENST00000528819 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
XRRA1-209ENST00000528819 SYNJ2O15056 1496 aa13□□□□□ -0.33
XRRA1-209ENST00000528819 CHD1O14646 1710 aa12.99□□□□□ -0.33
XRRA1-209ENST00000528819 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
XRRA1-209ENST00000528819 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
XRRA1-209ENST00000528819 CARMIL1Q5VZK9 1371 aa12.96□□□□□ -0.33
XRRA1-209ENST00000528819 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
XRRA1-209ENST00000528819 GRIN2AQ12879 1464 aa12.94□□□□□ -0.34
XRRA1-209ENST00000528819 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
XRRA1-209ENST00000528819 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
XRRA1-209ENST00000528819 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
XRRA1-209ENST00000528819 CUL7Q14999 1698 aa12.93□□□□□ -0.34
XRRA1-209ENST00000528819 MSH5O43196 834 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms