RNA–Protein interactions for RNA: ENST00000497830.5

MCCC1-212, Transcript of methylcrotonoyl-CoA carboxylase 1, humanhuman

TSL 1 (best)

Gene MCCC1, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC1-212ENST00000497830 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
MCCC1-212ENST00000497830 CCDC180Q9P1Z9 1646 aa35.07■■■■□ 3.2
MCCC1-212ENST00000497830 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
MCCC1-212ENST00000497830 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
MCCC1-212ENST00000497830 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
MCCC1-212ENST00000497830 DCAF1Q9Y4B6 1507 aa33.55■■■□□ 2.96
MCCC1-212ENST00000497830 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
MCCC1-212ENST00000497830 MYO15BQ96JP2 1530 aa32.9■■■□□ 2.86
MCCC1-212ENST00000497830 CHIC1Q5VXU3 224 aa32.84■■■□□ 2.85
MCCC1-212ENST00000497830 ABCC9O60706 1549 aa32.84■■■□□ 2.85
MCCC1-212ENST00000497830 HRCP23327 699 aa32.79■■■□□ 2.84
MCCC1-212ENST00000497830 NACADO15069 1562 aa32.57■■■□□ 2.81
MCCC1-212ENST00000497830 SCRIBQ14160 1630 aa32.49■■■□□ 2.79
MCCC1-212ENST00000497830 PCGF6Q9BYE7 350 aa32.38■■■□□ 2.77
MCCC1-212ENST00000497830 RB1CC1Q8TDY2 1594 aa32.17■■■□□ 2.74
MCCC1-212ENST00000497830 PPARGC1BQ86YN6 1023 aaKnown RBP32.01■■■□□ 2.71
MCCC1-212ENST00000497830 LOC105371045A0A1W2PR82 267 aa31.9■■■□□ 2.7
MCCC1-212ENST00000497830 RSF1Q96T23 1441 aaPredicted RBP31.83■■■□□ 2.69
MCCC1-212ENST00000497830 TRIM26Q12899 539 aaPredicted RBP31.65■■■□□ 2.66
MCCC1-212ENST00000497830 CECR2Q9BXF3 1484 aa31.64■■■□□ 2.66
MCCC1-212ENST00000497830 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
MCCC1-212ENST00000497830 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
MCCC1-212ENST00000497830 BAZ1AQ9NRL2 1556 aaPredicted RBP31.33■■■□□ 2.61
MCCC1-212ENST00000497830 WIZO95785 1651 aa31.26■■■□□ 2.59
MCCC1-212ENST00000497830 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
MCCC1-212ENST00000497830 ZEB1P37275 1124 aaPredicted RBP31.21■■■□□ 2.59
MCCC1-212ENST00000497830 PABPN1Q86U42 306 aaKnown RBP eCLIP31.16■■■□□ 2.58
MCCC1-212ENST00000497830 TRIM41Q8WV44 630 aa31.16■■■□□ 2.58
MCCC1-212ENST00000497830 SMARCA4P51532 1647 aa31.13■■■□□ 2.57
MCCC1-212ENST00000497830 FAM9AQ8IZU1 332 aaPredicted RBP30.93■■■□□ 2.54
MCCC1-212ENST00000497830 TOP2AP11388 1531 aaKnown RBP30.9■■■□□ 2.54
MCCC1-212ENST00000497830 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
MCCC1-212ENST00000497830 CCDC88BA6NC98 1476 aa30.66■■■□□ 2.5
MCCC1-212ENST00000497830 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
MCCC1-212ENST00000497830 EHMT2Q96KQ7 1210 aa30.65■■■□□ 2.5
MCCC1-212ENST00000497830 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
MCCC1-212ENST00000497830 PELP1Q8IZL8 1130 aaKnown RBP30.61■■■□□ 2.49
MCCC1-212ENST00000497830 SCAF1Q9H7N4 1312 aaKnown RBP30.56■■■□□ 2.48
MCCC1-212ENST00000497830 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
MCCC1-212ENST00000497830 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
MCCC1-212ENST00000497830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.27■■■□□ 2.44
MCCC1-212ENST00000497830 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
MCCC1-212ENST00000497830 CCER1Q8TC90 406 aaPredicted RBP30.23■■■□□ 2.43
MCCC1-212ENST00000497830 NCAPD3P42695 1498 aa30.11■■■□□ 2.41
MCCC1-212ENST00000497830 ACIN1Q9UKV3 1341 aaKnown RBP30.1■■■□□ 2.41
MCCC1-212ENST00000497830 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
MCCC1-212ENST00000497830 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
MCCC1-212ENST00000497830 NEUROD1Q13562 356 aa29.99■■■□□ 2.39
MCCC1-212ENST00000497830 DIEXFQ68CQ4 756 aaKnown RBP29.95■■■□□ 2.39
MCCC1-212ENST00000497830 CEP162Q5TB80 1403 aa29.92■■■□□ 2.38
MCCC1-212ENST00000497830 TNIKQ9UKE5 1360 aa29.83■■■□□ 2.37
MCCC1-212ENST00000497830 CENPBP07199 599 aaPredicted RBP29.83■■■□□ 2.37
MCCC1-212ENST00000497830 TTBK1Q5TCY1 1321 aaPredicted RBP29.82■■■□□ 2.36
MCCC1-212ENST00000497830 SOGA1O94964 1423 aa29.81■■■□□ 2.36
MCCC1-212ENST00000497830 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
MCCC1-212ENST00000497830 EEA1Q15075 1411 aa29.76■■■□□ 2.35
MCCC1-212ENST00000497830 GTF3C3Q9Y5Q9 886 aa29.75■■■□□ 2.35
MCCC1-212ENST00000497830 RUSC2Q8N2Y8 1516 aa29.67■■■□□ 2.34
MCCC1-212ENST00000497830 CSRNP3Q8WYN3 585 aa29.67■■■□□ 2.34
MCCC1-212ENST00000497830 CC2D2AQ9P2K1 1620 aa29.66■■■□□ 2.34
MCCC1-212ENST00000497830 CFTRP13569 1480 aa29.62■■■□□ 2.33
MCCC1-212ENST00000497830 ZNF316A6NFI3 1004 aaPredicted RBP29.6■■■□□ 2.33
MCCC1-212ENST00000497830 UBTFP17480 764 aaKnown RBP29.59■■■□□ 2.33
MCCC1-212ENST00000497830 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
MCCC1-212ENST00000497830 GOLGA3Q08378 1498 aa29.56■■■□□ 2.32
MCCC1-212ENST00000497830 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
MCCC1-212ENST00000497830 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
MCCC1-212ENST00000497830 CUX1P39880 1505 aa29.39■■■□□ 2.3
MCCC1-212ENST00000497830 PRDM2Q13029 1718 aa29.39■■■□□ 2.29
MCCC1-212ENST00000497830 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
MCCC1-212ENST00000497830 KIF21BO75037 1637 aa29.34■■■□□ 2.29
MCCC1-212ENST00000497830 HNRNPUL2Q1KMD3 747 aaKnown RBP29.28■■■□□ 2.28
MCCC1-212ENST00000497830 YTHDC1Q96MU7 727 aaKnown RBP29.27■■■□□ 2.28
MCCC1-212ENST00000497830 CLIP1P30622 1438 aa29.24■■■□□ 2.27
MCCC1-212ENST00000497830 MIER1Q8N108 512 aa29.24■■■□□ 2.27
MCCC1-212ENST00000497830 MYT1Q01538 1121 aa29.22■■■□□ 2.27
MCCC1-212ENST00000497830 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
MCCC1-212ENST00000497830 RAPGEF2Q9Y4G8 1499 aa29.16■■■□□ 2.26
MCCC1-212ENST00000497830 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
MCCC1-212ENST00000497830 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
MCCC1-212ENST00000497830 PRXQ9BXM0 1461 aa29.07■■■□□ 2.24
MCCC1-212ENST00000497830 APLP2Q06481 763 aa29.06■■■□□ 2.24
MCCC1-212ENST00000497830 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
MCCC1-212ENST00000497830 NESP48681 1621 aa29.02■■■□□ 2.24
MCCC1-212ENST00000497830 FGD5Q6ZNL6 1462 aa28.99■■■□□ 2.23
MCCC1-212ENST00000497830 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
MCCC1-212ENST00000497830 CUX2O14529 1486 aa28.93■■■□□ 2.22
MCCC1-212ENST00000497830 DNAJC5BQ9UF47 199 aa28.9■■■□□ 2.22
MCCC1-212ENST00000497830 DNMBPQ6XZF7 1577 aa28.9■■■□□ 2.22
MCCC1-212ENST00000497830 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
MCCC1-212ENST00000497830 RANGAP1P46060 587 aaPredicted RBP28.86■■■□□ 2.21
MCCC1-212ENST00000497830 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
MCCC1-212ENST00000497830 IGF1RP08069 1367 aa28.83■■■□□ 2.21
MCCC1-212ENST00000497830 DHX57Q6P158 1386 aaKnown RBP28.81■■■□□ 2.2
MCCC1-212ENST00000497830 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.2
MCCC1-212ENST00000497830 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
MCCC1-212ENST00000497830 RAD54L2Q9Y4B4 1467 aa28.72■■■□□ 2.19
MCCC1-212ENST00000497830 ARAP1Q96P48 1450 aa28.71■■■□□ 2.19
MCCC1-212ENST00000497830 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
MCCC1-212ENST00000497830 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms