RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
CTDSPL2-205ENST00000558968 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
CTDSPL2-205ENST00000558968 ABCC9O60706 1549 aa23.09■■□□□ 1.29
CTDSPL2-205ENST00000558968 RB1CC1Q8TDY2 1594 aa22■■□□□ 1.11
CTDSPL2-205ENST00000558968 NACADO15069 1562 aa21.86■■□□□ 1.09
CTDSPL2-205ENST00000558968 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
CTDSPL2-205ENST00000558968 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
CTDSPL2-205ENST00000558968 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
CTDSPL2-205ENST00000558968 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
CTDSPL2-205ENST00000558968 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
CTDSPL2-205ENST00000558968 ZCCHC6Q5VYS8 1495 aaKnown RBP21.44■■□□□ 1.02
CTDSPL2-205ENST00000558968 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
CTDSPL2-205ENST00000558968 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
CTDSPL2-205ENST00000558968 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
CTDSPL2-205ENST00000558968 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
CTDSPL2-205ENST00000558968 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
CTDSPL2-205ENST00000558968 EIF4G1Q04637 1599 aaKnown RBP20.84■□□□□ 0.93
CTDSPL2-205ENST00000558968 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
CTDSPL2-205ENST00000558968 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
CTDSPL2-205ENST00000558968 NCAPD3P42695 1498 aa20.14■□□□□ 0.81
CTDSPL2-205ENST00000558968 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
CTDSPL2-205ENST00000558968 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
CTDSPL2-205ENST00000558968 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
CTDSPL2-205ENST00000558968 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
CTDSPL2-205ENST00000558968 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
CTDSPL2-205ENST00000558968 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
CTDSPL2-205ENST00000558968 PEG3Q9GZU2 1588 aa19.94■□□□□ 0.78
CTDSPL2-205ENST00000558968 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
CTDSPL2-205ENST00000558968 NESP48681 1621 aa19.87■□□□□ 0.77
CTDSPL2-205ENST00000558968 CUX2O14529 1486 aa19.82■□□□□ 0.76
CTDSPL2-205ENST00000558968 WIZO95785 1651 aa19.75■□□□□ 0.75
CTDSPL2-205ENST00000558968 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
CTDSPL2-205ENST00000558968 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
CTDSPL2-205ENST00000558968 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
CTDSPL2-205ENST00000558968 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
CTDSPL2-205ENST00000558968 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
CTDSPL2-205ENST00000558968 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
CTDSPL2-205ENST00000558968 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.72
CTDSPL2-205ENST00000558968 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
CTDSPL2-205ENST00000558968 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
CTDSPL2-205ENST00000558968 WDR62O43379 1518 aa19.38■□□□□ 0.69
CTDSPL2-205ENST00000558968 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
CTDSPL2-205ENST00000558968 CFTRP13569 1480 aa19.35■□□□□ 0.69
CTDSPL2-205ENST00000558968 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
CTDSPL2-205ENST00000558968 PRDM2Q13029 1718 aa19.3■□□□□ 0.68
CTDSPL2-205ENST00000558968 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
CTDSPL2-205ENST00000558968 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
CTDSPL2-205ENST00000558968 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
CTDSPL2-205ENST00000558968 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
CTDSPL2-205ENST00000558968 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
CTDSPL2-205ENST00000558968 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
CTDSPL2-205ENST00000558968 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
CTDSPL2-205ENST00000558968 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
CTDSPL2-205ENST00000558968 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
CTDSPL2-205ENST00000558968 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.61
CTDSPL2-205ENST00000558968 TARBP1Q13395 1621 aaKnown RBP18.86■□□□□ 0.61
CTDSPL2-205ENST00000558968 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
CTDSPL2-205ENST00000558968 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
CTDSPL2-205ENST00000558968 CHD1O14646 1710 aa18.77■□□□□ 0.6
CTDSPL2-205ENST00000558968 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.59
CTDSPL2-205ENST00000558968 SUPT5HO00267 1087 aaKnown RBP18.76■□□□□ 0.59
CTDSPL2-205ENST00000558968 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
CTDSPL2-205ENST00000558968 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
CTDSPL2-205ENST00000558968 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
CTDSPL2-205ENST00000558968 CUX1P39880 1505 aa18.73■□□□□ 0.59
CTDSPL2-205ENST00000558968 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
CTDSPL2-205ENST00000558968 SOGA1O94964 1423 aa18.71■□□□□ 0.59
CTDSPL2-205ENST00000558968 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
CTDSPL2-205ENST00000558968 ARHGEF11O15085 1522 aa18.66■□□□□ 0.58
CTDSPL2-205ENST00000558968 FBLN2P98095 1184 aa18.64■□□□□ 0.57
CTDSPL2-205ENST00000558968 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
CTDSPL2-205ENST00000558968 SNAPC4Q5SXM2 1469 aa18.6■□□□□ 0.57
CTDSPL2-205ENST00000558968 PBRM1Q86U86 1689 aa18.58■□□□□ 0.57
CTDSPL2-205ENST00000558968 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
CTDSPL2-205ENST00000558968 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
CTDSPL2-205ENST00000558968 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
CTDSPL2-205ENST00000558968 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
CTDSPL2-205ENST00000558968 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
CTDSPL2-205ENST00000558968 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
CTDSPL2-205ENST00000558968 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
CTDSPL2-205ENST00000558968 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
CTDSPL2-205ENST00000558968 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
CTDSPL2-205ENST00000558968 ARAP1Q96P48 1450 aa18.48■□□□□ 0.55
CTDSPL2-205ENST00000558968 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
CTDSPL2-205ENST00000558968 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
CTDSPL2-205ENST00000558968 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
CTDSPL2-205ENST00000558968 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
CTDSPL2-205ENST00000558968 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
CTDSPL2-205ENST00000558968 GRIN2AQ12879 1464 aa18.32■□□□□ 0.52
CTDSPL2-205ENST00000558968 CEP170Q5SW79 1584 aa18.28■□□□□ 0.52
CTDSPL2-205ENST00000558968 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
CTDSPL2-205ENST00000558968 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
CTDSPL2-205ENST00000558968 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
CTDSPL2-205ENST00000558968 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
CTDSPL2-205ENST00000558968 NUP160Q12769 1436 aa18.23■□□□□ 0.51
CTDSPL2-205ENST00000558968 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
CTDSPL2-205ENST00000558968 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
CTDSPL2-205ENST00000558968 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
CTDSPL2-205ENST00000558968 CUL7Q14999 1698 aa18.05■□□□□ 0.48
CTDSPL2-205ENST00000558968 KIF27Q86VH2 1401 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms