RNA–Protein interactions for RNA: ENST00000496333.5

NCOA1-211, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 3

Gene NCOA1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-211ENST00000496333 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
NCOA1-211ENST00000496333 ABCC9O60706 1549 aa38.08■■■■□ 3.69
NCOA1-211ENST00000496333 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
NCOA1-211ENST00000496333 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
NCOA1-211ENST00000496333 RB1CC1Q8TDY2 1594 aa36.01■■■■□ 3.35
NCOA1-211ENST00000496333 NACADO15069 1562 aa35.66■■■■□ 3.3
NCOA1-211ENST00000496333 DCAF8L2P0C7V8 631 aa35.54■■■■□ 3.28
NCOA1-211ENST00000496333 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
NCOA1-211ENST00000496333 UNC13AQ9UPW8 1703 aa35.29■■■■□ 3.24
NCOA1-211ENST00000496333 BICRAQ9NZM4 1560 aa35.04■■■■□ 3.2
NCOA1-211ENST00000496333 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.19
NCOA1-211ENST00000496333 ZCCHC6Q5VYS8 1495 aaKnown RBP34.61■■■■□ 3.13
NCOA1-211ENST00000496333 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
NCOA1-211ENST00000496333 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
NCOA1-211ENST00000496333 SHROOM4Q9ULL8 1493 aa34.36■■■■□ 3.09
NCOA1-211ENST00000496333 CC2D2AQ9P2K1 1620 aa34.36■■■■□ 3.09
NCOA1-211ENST00000496333 CECR2Q9BXF3 1484 aa34.29■■■■□ 3.08
NCOA1-211ENST00000496333 EIF4G1Q04637 1599 aaKnown RBP34.19■■■■□ 3.06
NCOA1-211ENST00000496333 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
NCOA1-211ENST00000496333 NCAPD3P42695 1498 aa32.94■■■□□ 2.86
NCOA1-211ENST00000496333 ERCC6Q03468 1493 aa32.85■■■□□ 2.85
NCOA1-211ENST00000496333 CUX2O14529 1486 aa32.84■■■□□ 2.85
NCOA1-211ENST00000496333 ATAD2BQ9ULI0 1458 aa32.83■■■□□ 2.85
NCOA1-211ENST00000496333 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
NCOA1-211ENST00000496333 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
NCOA1-211ENST00000496333 HMGXB3Q12766 1538 aa32.66■■■□□ 2.82
NCOA1-211ENST00000496333 NESP48681 1621 aa32.65■■■□□ 2.82
NCOA1-211ENST00000496333 BAZ1BQ9UIG0 1483 aaKnown RBP32.49■■■□□ 2.79
NCOA1-211ENST00000496333 BAZ1AQ9NRL2 1556 aaPredicted RBP32.48■■■□□ 2.79
NCOA1-211ENST00000496333 PEG3Q9GZU2 1588 aa32.36■■■□□ 2.77
NCOA1-211ENST00000496333 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.77
NCOA1-211ENST00000496333 MROH2BQ7Z745 1585 aa32.3■■■□□ 2.76
NCOA1-211ENST00000496333 LAMC3Q9Y6N6 1575 aa32.24■■■□□ 2.75
NCOA1-211ENST00000496333 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
NCOA1-211ENST00000496333 PDS5BQ9NTI5 1447 aa32.06■■■□□ 2.72
NCOA1-211ENST00000496333 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
NCOA1-211ENST00000496333 WIZO95785 1651 aa31.92■■■□□ 2.7
NCOA1-211ENST00000496333 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
NCOA1-211ENST00000496333 WDR62O43379 1518 aa31.77■■■□□ 2.68
NCOA1-211ENST00000496333 TRIM41Q8WV44 630 aa31.74■■■□□ 2.67
NCOA1-211ENST00000496333 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
NCOA1-211ENST00000496333 FANCD2Q9BXW9 1451 aa31.61■■■□□ 2.65
NCOA1-211ENST00000496333 CFTRP13569 1480 aa31.51■■■□□ 2.63
NCOA1-211ENST00000496333 RSF1Q96T23 1441 aaPredicted RBP31.48■■■□□ 2.63
NCOA1-211ENST00000496333 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
NCOA1-211ENST00000496333 URB2Q14146 1524 aaKnown RBP31.4■■■□□ 2.62
NCOA1-211ENST00000496333 OSCARQ8IYS5 282 aa31.32■■■□□ 2.6
NCOA1-211ENST00000496333 PRDM2Q13029 1718 aa31.17■■■□□ 2.58
NCOA1-211ENST00000496333 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
NCOA1-211ENST00000496333 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
NCOA1-211ENST00000496333 RIMBP3CA6NJZ7 1639 aa31.01■■■□□ 2.55
NCOA1-211ENST00000496333 RIMBP3BA6NNM3 1639 aa31.01■■■□□ 2.55
NCOA1-211ENST00000496333 RIMBP3Q9UFD9 1639 aa31.01■■■□□ 2.55
NCOA1-211ENST00000496333 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
NCOA1-211ENST00000496333 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
NCOA1-211ENST00000496333 EIF4G3O43432 1585 aaKnown RBP30.87■■■□□ 2.53
NCOA1-211ENST00000496333 ARHGEF11O15085 1522 aa30.86■■■□□ 2.53
NCOA1-211ENST00000496333 DNMBPQ6XZF7 1577 aa30.81■■■□□ 2.52
NCOA1-211ENST00000496333 ABCC8Q09428 1581 aa30.79■■■□□ 2.52
NCOA1-211ENST00000496333 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.51
NCOA1-211ENST00000496333 TARBP1Q13395 1621 aaKnown RBP30.74■■■□□ 2.51
NCOA1-211ENST00000496333 CHD1O14646 1710 aa30.73■■■□□ 2.51
NCOA1-211ENST00000496333 CYB5RLQ6IPT4 315 aa30.67■■■□□ 2.5
NCOA1-211ENST00000496333 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.5
NCOA1-211ENST00000496333 FBLN2P98095 1184 aa30.61■■■□□ 2.49
NCOA1-211ENST00000496333 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
NCOA1-211ENST00000496333 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
NCOA1-211ENST00000496333 TDRD9Q8NDG6 1382 aaKnown RBP30.52■■■□□ 2.48
NCOA1-211ENST00000496333 SOGA1O94964 1423 aa30.48■■■□□ 2.47
NCOA1-211ENST00000496333 TRHP20396 242 aaPredicted RBP30.44■■■□□ 2.46
NCOA1-211ENST00000496333 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
NCOA1-211ENST00000496333 SNAPC4Q5SXM2 1469 aa30.41■■■□□ 2.46
NCOA1-211ENST00000496333 CUX1P39880 1505 aa30.36■■■□□ 2.45
NCOA1-211ENST00000496333 CLASP1Q7Z460 1538 aa30.32■■■□□ 2.44
NCOA1-211ENST00000496333 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
NCOA1-211ENST00000496333 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
NCOA1-211ENST00000496333 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
NCOA1-211ENST00000496333 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
NCOA1-211ENST00000496333 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
NCOA1-211ENST00000496333 SYNJ2O15056 1496 aa30.18■■■□□ 2.42
NCOA1-211ENST00000496333 PBRM1Q86U86 1689 aa30.14■■■□□ 2.42
NCOA1-211ENST00000496333 GAPVD1Q14C86 1478 aa30.11■■■□□ 2.41
NCOA1-211ENST00000496333 ABCA5Q8WWZ7 1642 aa30.02■■■□□ 2.4
NCOA1-211ENST00000496333 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.39
NCOA1-211ENST00000496333 ERCC6L2Q5T890 1561 aa29.91■■■□□ 2.38
NCOA1-211ENST00000496333 SUPT5HO00267 1087 aaKnown RBP29.91■■■□□ 2.38
NCOA1-211ENST00000496333 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
NCOA1-211ENST00000496333 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
NCOA1-211ENST00000496333 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
NCOA1-211ENST00000496333 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
NCOA1-211ENST00000496333 NUP160Q12769 1436 aa29.76■■■□□ 2.35
NCOA1-211ENST00000496333 BIVM-ERCC5R4GMW8 1640 aa29.74■■■□□ 2.35
NCOA1-211ENST00000496333 AEBP2Q6ZN18 517 aaPredicted RBP29.74■■■□□ 2.35
NCOA1-211ENST00000496333 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
NCOA1-211ENST00000496333 FHAD1B1AJZ9 1412 aa29.69■■■□□ 2.34
NCOA1-211ENST00000496333 SHROOM2Q13796 1616 aa29.68■■■□□ 2.34
NCOA1-211ENST00000496333 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
NCOA1-211ENST00000496333 PRG4Q92954 1404 aaPredicted RBP29.54■■■□□ 2.32
NCOA1-211ENST00000496333 KIF13AQ9H1H9 1805 aa29.5■■■□□ 2.31
NCOA1-211ENST00000496333 JPH4Q96JJ6 628 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms