RNA–Protein interactions for RNA: ENST00000452564.1

PIKFYVE-207, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 2

Gene PIKFYVE, Length 4,214 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-207ENST00000452564 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
PIKFYVE-207ENST00000452564 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
PIKFYVE-207ENST00000452564 ABCC9O60706 1549 aa16.5■□□□□ 0.23
PIKFYVE-207ENST00000452564 UNC13AQ9UPW8 1703 aa15.95■□□□□ 0.14
PIKFYVE-207ENST00000452564 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
PIKFYVE-207ENST00000452564 NACADO15069 1562 aa15.88■□□□□ 0.13
PIKFYVE-207ENST00000452564 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
PIKFYVE-207ENST00000452564 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.11
PIKFYVE-207ENST00000452564 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
PIKFYVE-207ENST00000452564 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
PIKFYVE-207ENST00000452564 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.08
PIKFYVE-207ENST00000452564 ZCCHC6Q5VYS8 1495 aaKnown RBP15.36■□□□□ 0.05
PIKFYVE-207ENST00000452564 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
PIKFYVE-207ENST00000452564 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
PIKFYVE-207ENST00000452564 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
PIKFYVE-207ENST00000452564 SCRIBQ14160 1630 aa15□□□□□ -0.01
PIKFYVE-207ENST00000452564 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
PIKFYVE-207ENST00000452564 CUX2O14529 1486 aa14.63□□□□□ -0.07
PIKFYVE-207ENST00000452564 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
PIKFYVE-207ENST00000452564 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
PIKFYVE-207ENST00000452564 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
PIKFYVE-207ENST00000452564 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.07
PIKFYVE-207ENST00000452564 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
PIKFYVE-207ENST00000452564 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
PIKFYVE-207ENST00000452564 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
PIKFYVE-207ENST00000452564 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
PIKFYVE-207ENST00000452564 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
PIKFYVE-207ENST00000452564 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
PIKFYVE-207ENST00000452564 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.12
PIKFYVE-207ENST00000452564 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
PIKFYVE-207ENST00000452564 NESP48681 1621 aa14.26□□□□□ -0.13
PIKFYVE-207ENST00000452564 WDR62O43379 1518 aa14.2□□□□□ -0.14
PIKFYVE-207ENST00000452564 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
PIKFYVE-207ENST00000452564 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
PIKFYVE-207ENST00000452564 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
PIKFYVE-207ENST00000452564 ERCC6Q03468 1493 aa14.13□□□□□ -0.15
PIKFYVE-207ENST00000452564 WIZO95785 1651 aa14.02□□□□□ -0.16
PIKFYVE-207ENST00000452564 MRC2Q9UBG0 1479 aa14.01□□□□□ -0.17
PIKFYVE-207ENST00000452564 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.17
PIKFYVE-207ENST00000452564 CADPSQ9ULU8 1353 aa13.95□□□□□ -0.18
PIKFYVE-207ENST00000452564 CFTRP13569 1480 aa13.93□□□□□ -0.18
PIKFYVE-207ENST00000452564 TOP2AP11388 1531 aaKnown RBP13.88□□□□□ -0.19
PIKFYVE-207ENST00000452564 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
PIKFYVE-207ENST00000452564 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
PIKFYVE-207ENST00000452564 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
PIKFYVE-207ENST00000452564 RIMBP3CA6NJZ7 1639 aa13.77□□□□□ -0.2
PIKFYVE-207ENST00000452564 RIMBP3BA6NNM3 1639 aa13.77□□□□□ -0.2
PIKFYVE-207ENST00000452564 RIMBP3Q9UFD9 1639 aa13.77□□□□□ -0.2
PIKFYVE-207ENST00000452564 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
PIKFYVE-207ENST00000452564 RSF1Q96T23 1441 aaPredicted RBP13.74□□□□□ -0.21
PIKFYVE-207ENST00000452564 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
PIKFYVE-207ENST00000452564 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
PIKFYVE-207ENST00000452564 CHD1O14646 1710 aa13.65□□□□□ -0.22
PIKFYVE-207ENST00000452564 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
PIKFYVE-207ENST00000452564 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
PIKFYVE-207ENST00000452564 TOPBP1Q92547 1522 aa13.61□□□□□ -0.23
PIKFYVE-207ENST00000452564 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
PIKFYVE-207ENST00000452564 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
PIKFYVE-207ENST00000452564 CLASP1Q7Z460 1538 aa13.59□□□□□ -0.23
PIKFYVE-207ENST00000452564 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
PIKFYVE-207ENST00000452564 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
PIKFYVE-207ENST00000452564 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
PIKFYVE-207ENST00000452564 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
PIKFYVE-207ENST00000452564 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
PIKFYVE-207ENST00000452564 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
PIKFYVE-207ENST00000452564 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
PIKFYVE-207ENST00000452564 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
PIKFYVE-207ENST00000452564 CUX1P39880 1505 aa13.36□□□□□ -0.27
PIKFYVE-207ENST00000452564 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
PIKFYVE-207ENST00000452564 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
PIKFYVE-207ENST00000452564 AQRO60306 1485 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■□□□□ 9
PIKFYVE-207ENST00000452564 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
PIKFYVE-207ENST00000452564 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
PIKFYVE-207ENST00000452564 SNAPC4Q5SXM2 1469 aa13.26□□□□□ -0.29
PIKFYVE-207ENST00000452564 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
PIKFYVE-207ENST00000452564 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
PIKFYVE-207ENST00000452564 ABCA10Q8WWZ4 1543 aa13.25□□□□□ -0.29
PIKFYVE-207ENST00000452564 KIF13AQ9H1H9 1805 aa13.25□□□□□ -0.29
PIKFYVE-207ENST00000452564 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
PIKFYVE-207ENST00000452564 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
PIKFYVE-207ENST00000452564 GRIN2BQ13224 1484 aa13.21□□□□□ -0.29
PIKFYVE-207ENST00000452564 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
PIKFYVE-207ENST00000452564 NUP160Q12769 1436 aa13.17□□□□□ -0.3
PIKFYVE-207ENST00000452564 SOGA1O94964 1423 aa13.17□□□□□ -0.3
PIKFYVE-207ENST00000452564 ERCC6L2Q5T890 1561 aa13.17□□□□□ -0.3
PIKFYVE-207ENST00000452564 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
PIKFYVE-207ENST00000452564 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
PIKFYVE-207ENST00000452564 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
PIKFYVE-207ENST00000452564 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
PIKFYVE-207ENST00000452564 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.31
PIKFYVE-207ENST00000452564 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
PIKFYVE-207ENST00000452564 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
PIKFYVE-207ENST00000452564 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
PIKFYVE-207ENST00000452564 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
PIKFYVE-207ENST00000452564 DIP2BQ9P265 1576 aa12.99□□□□□ -0.33
PIKFYVE-207ENST00000452564 CYB5RLQ6IPT4 315 aa12.98□□□□□ -0.33
PIKFYVE-207ENST00000452564 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.34
PIKFYVE-207ENST00000452564 CUL7Q14999 1698 aa12.9□□□□□ -0.34
PIKFYVE-207ENST00000452564 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
PIKFYVE-207ENST00000452564 GLI2P10070 1586 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms