RNA–Protein interactions for RNA: ENST00000321448.12

XRRA1-201, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 1 (best) BASIC

Gene XRRA1, Length 4,695 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-201ENST00000321448 DCAF8L2P0C7V8 631 aa21.82■■□□□ 1.08
XRRA1-201ENST00000321448 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
XRRA1-201ENST00000321448 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
XRRA1-201ENST00000321448 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
XRRA1-201ENST00000321448 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
XRRA1-201ENST00000321448 APLP2Q06481 763 aa19.24■□□□□ 0.67
XRRA1-201ENST00000321448 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
XRRA1-201ENST00000321448 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
XRRA1-201ENST00000321448 RANGAP1P46060 587 aaPredicted RBP18.91■□□□□ 0.62
XRRA1-201ENST00000321448 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
XRRA1-201ENST00000321448 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
XRRA1-201ENST00000321448 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
XRRA1-201ENST00000321448 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
XRRA1-201ENST00000321448 ABCC9O60706 1549 aa18.52■□□□□ 0.55
XRRA1-201ENST00000321448 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
XRRA1-201ENST00000321448 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.52
XRRA1-201ENST00000321448 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
XRRA1-201ENST00000321448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
XRRA1-201ENST00000321448 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
XRRA1-201ENST00000321448 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
XRRA1-201ENST00000321448 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
XRRA1-201ENST00000321448 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
XRRA1-201ENST00000321448 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.49
XRRA1-201ENST00000321448 ITGAEP38570 1179 aa18.02■□□□□ 0.48
XRRA1-201ENST00000321448 LOC105371045A0A1W2PR82 267 aa18.01■□□□□ 0.47
XRRA1-201ENST00000321448 TRIM26Q12899 539 aaPredicted RBP17.89■□□□□ 0.45
XRRA1-201ENST00000321448 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
XRRA1-201ENST00000321448 FBLN2P98095 1184 aa17.76■□□□□ 0.43
XRRA1-201ENST00000321448 POLR3GLQ9BT43 218 aa17.69■□□□□ 0.42
XRRA1-201ENST00000321448 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
XRRA1-201ENST00000321448 NEFLP07196 543 aa17.62■□□□□ 0.41
XRRA1-201ENST00000321448 FAM50AQ14320 339 aaKnown RBP17.62■□□□□ 0.41
XRRA1-201ENST00000321448 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
XRRA1-201ENST00000321448 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
XRRA1-201ENST00000321448 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
XRRA1-201ENST00000321448 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
XRRA1-201ENST00000321448 ERICH6Q7L0X2 663 aa17.47■□□□□ 0.39
XRRA1-201ENST00000321448 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
XRRA1-201ENST00000321448 HRCP23327 699 aa17.45■□□□□ 0.38
XRRA1-201ENST00000321448 P3H3Q8IVL6 736 aa17.44■□□□□ 0.38
XRRA1-201ENST00000321448 SLC4A1APQ9BWU0 796 aaKnown RBP17.44■□□□□ 0.38
XRRA1-201ENST00000321448 ARID3CA6NKF2 412 aa17.4■□□□□ 0.38
XRRA1-201ENST00000321448 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
XRRA1-201ENST00000321448 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
XRRA1-201ENST00000321448 CDK11AQ9UQ88 783 aaPredicted RBP17.27■□□□□ 0.35
XRRA1-201ENST00000321448 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
XRRA1-201ENST00000321448 ZNF777Q9ULD5 760 aaPredicted RBP17.23■□□□□ 0.35
XRRA1-201ENST00000321448 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
XRRA1-201ENST00000321448 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
XRRA1-201ENST00000321448 BCANQ96GW7 911 aa17.11■□□□□ 0.33
XRRA1-201ENST00000321448 DIEXFQ68CQ4 756 aaKnown RBP17.09■□□□□ 0.33
XRRA1-201ENST00000321448 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
XRRA1-201ENST00000321448 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
XRRA1-201ENST00000321448 NACADO15069 1562 aa17.04■□□□□ 0.32
XRRA1-201ENST00000321448 DAXXQ9UER7 740 aaPredicted RBP17.01■□□□□ 0.31
XRRA1-201ENST00000321448 ANP32CO43423 234 aa16.93■□□□□ 0.3
XRRA1-201ENST00000321448 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
XRRA1-201ENST00000321448 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
XRRA1-201ENST00000321448 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
XRRA1-201ENST00000321448 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
XRRA1-201ENST00000321448 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
XRRA1-201ENST00000321448 CLSPNQ9HAW4 1339 aa16.88■□□□□ 0.29
XRRA1-201ENST00000321448 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
XRRA1-201ENST00000321448 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
XRRA1-201ENST00000321448 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
XRRA1-201ENST00000321448 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
XRRA1-201ENST00000321448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.287e-6■■□□□ 13.5
XRRA1-201ENST00000321448 NEFMP07197 916 aa16.82■□□□□ 0.28
XRRA1-201ENST00000321448 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
XRRA1-201ENST00000321448 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
XRRA1-201ENST00000321448 TONSLQ96HA7 1378 aa16.78■□□□□ 0.28
XRRA1-201ENST00000321448 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.28
XRRA1-201ENST00000321448 KCNH8Q96L42 1107 aa16.77■□□□□ 0.28
XRRA1-201ENST00000321448 CLIP1P30622 1438 aa16.76■□□□□ 0.27
XRRA1-201ENST00000321448 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
XRRA1-201ENST00000321448 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
XRRA1-201ENST00000321448 EEA1Q15075 1411 aa16.71■□□□□ 0.27
XRRA1-201ENST00000321448 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
XRRA1-201ENST00000321448 ZBTB47Q9UFB7 747 aaPredicted RBP16.7■□□□□ 0.26
XRRA1-201ENST00000321448 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
XRRA1-201ENST00000321448 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
XRRA1-201ENST00000321448 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
XRRA1-201ENST00000321448 CANXP27824 592 aaKnown RBP16.66■□□□□ 0.26
XRRA1-201ENST00000321448 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
XRRA1-201ENST00000321448 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
XRRA1-201ENST00000321448 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
XRRA1-201ENST00000321448 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
XRRA1-201ENST00000321448 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
XRRA1-201ENST00000321448 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
XRRA1-201ENST00000321448 MYT1Q01538 1121 aa16.54■□□□□ 0.24
XRRA1-201ENST00000321448 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.24
XRRA1-201ENST00000321448 ARID4BQ4LE39 1312 aaPredicted RBP16.51■□□□□ 0.23
XRRA1-201ENST00000321448 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
XRRA1-201ENST00000321448 PPP1R15AO75807 674 aaPredicted RBP16.5■□□□□ 0.23
XRRA1-201ENST00000321448 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
XRRA1-201ENST00000321448 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
XRRA1-201ENST00000321448 CUX2O14529 1486 aa16.46■□□□□ 0.23
XRRA1-201ENST00000321448 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
XRRA1-201ENST00000321448 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
XRRA1-201ENST00000321448 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms