RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 AEBP2Q6ZN18 517 aaPredicted RBP27.72■■■□□ 2.03
CTDSPL2-208ENST00000559793 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
CTDSPL2-208ENST00000559793 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
CTDSPL2-208ENST00000559793 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
CTDSPL2-208ENST00000559793 FOXD1Q16676 465 aa21.88■■□□□ 1.09
CTDSPL2-208ENST00000559793 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
CTDSPL2-208ENST00000559793 PPP6R1Q9UPN7 881 aa20.92■□□□□ 0.94
CTDSPL2-208ENST00000559793 ADRA2BP18089 450 aa20.88■□□□□ 0.93
CTDSPL2-208ENST00000559793 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
CTDSPL2-208ENST00000559793 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
CTDSPL2-208ENST00000559793 MSH5O43196 834 aa20.24■□□□□ 0.83
CTDSPL2-208ENST00000559793 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
CTDSPL2-208ENST00000559793 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
CTDSPL2-208ENST00000559793 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
CTDSPL2-208ENST00000559793 DMRT2Q9Y5R5 561 aa18.77■□□□□ 0.6
CTDSPL2-208ENST00000559793 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
CTDSPL2-208ENST00000559793 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
CTDSPL2-208ENST00000559793 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
CTDSPL2-208ENST00000559793 ABCC9O60706 1549 aa18.52■□□□□ 0.56
CTDSPL2-208ENST00000559793 KCNA4P22459 653 aa18.5■□□□□ 0.55
CTDSPL2-208ENST00000559793 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
CTDSPL2-208ENST00000559793 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
CTDSPL2-208ENST00000559793 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
CTDSPL2-208ENST00000559793 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.51
CTDSPL2-208ENST00000559793 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
CTDSPL2-208ENST00000559793 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
CTDSPL2-208ENST00000559793 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
CTDSPL2-208ENST00000559793 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
CTDSPL2-208ENST00000559793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.382e-7■□□□□ 9.9
CTDSPL2-208ENST00000559793 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
CTDSPL2-208ENST00000559793 NACADO15069 1562 aa17.35■□□□□ 0.37
CTDSPL2-208ENST00000559793 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
CTDSPL2-208ENST00000559793 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
CTDSPL2-208ENST00000559793 PABPN1Q86U42 306 aaKnown RBP eCLIP17.27■□□□□ 0.36
CTDSPL2-208ENST00000559793 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
CTDSPL2-208ENST00000559793 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
CTDSPL2-208ENST00000559793 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
CTDSPL2-208ENST00000559793 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
CTDSPL2-208ENST00000559793 BICRAQ9NZM4 1560 aa17.05■□□□□ 0.32
CTDSPL2-208ENST00000559793 MYO15BQ96JP2 1530 aa17.03■□□□□ 0.32
CTDSPL2-208ENST00000559793 ZBTB22O15209 634 aa17.03■□□□□ 0.32
CTDSPL2-208ENST00000559793 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
CTDSPL2-208ENST00000559793 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
CTDSPL2-208ENST00000559793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
CTDSPL2-208ENST00000559793 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
CTDSPL2-208ENST00000559793 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
CTDSPL2-208ENST00000559793 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL2-208ENST00000559793 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
CTDSPL2-208ENST00000559793 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
CTDSPL2-208ENST00000559793 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
CTDSPL2-208ENST00000559793 APLP2Q06481 763 aa16.72■□□□□ 0.27
CTDSPL2-208ENST00000559793 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
CTDSPL2-208ENST00000559793 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
CTDSPL2-208ENST00000559793 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
CTDSPL2-208ENST00000559793 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
CTDSPL2-208ENST00000559793 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
CTDSPL2-208ENST00000559793 CAPN15O75808 1086 aa16.64■□□□□ 0.25
CTDSPL2-208ENST00000559793 EIF4G1Q04637 1599 aaKnown RBP16.61■□□□□ 0.25
CTDSPL2-208ENST00000559793 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
CTDSPL2-208ENST00000559793 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
CTDSPL2-208ENST00000559793 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
CTDSPL2-208ENST00000559793 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
CTDSPL2-208ENST00000559793 DSG3P32926 999 aa16.43■□□□□ 0.22
CTDSPL2-208ENST00000559793 ABCB7O75027 752 aa16.31■□□□□ 0.2
CTDSPL2-208ENST00000559793 DNAJC5Q9H3Z4 198 aa16.29■□□□□ 0.2
CTDSPL2-208ENST00000559793 POLA2Q14181 598 aa16.23■□□□□ 0.19
CTDSPL2-208ENST00000559793 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
CTDSPL2-208ENST00000559793 CUX2O14529 1486 aa15.99■□□□□ 0.15
CTDSPL2-208ENST00000559793 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
CTDSPL2-208ENST00000559793 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
CTDSPL2-208ENST00000559793 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
CTDSPL2-208ENST00000559793 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
CTDSPL2-208ENST00000559793 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
CTDSPL2-208ENST00000559793 NESP48681 1621 aa15.87■□□□□ 0.13
CTDSPL2-208ENST00000559793 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
CTDSPL2-208ENST00000559793 FBLN2P98095 1184 aa15.8■□□□□ 0.12
CTDSPL2-208ENST00000559793 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
CTDSPL2-208ENST00000559793 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
CTDSPL2-208ENST00000559793 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
CTDSPL2-208ENST00000559793 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
CTDSPL2-208ENST00000559793 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
CTDSPL2-208ENST00000559793 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
CTDSPL2-208ENST00000559793 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
CTDSPL2-208ENST00000559793 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
CTDSPL2-208ENST00000559793 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
CTDSPL2-208ENST00000559793 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
CTDSPL2-208ENST00000559793 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
CTDSPL2-208ENST00000559793 CADPSQ9ULU8 1353 aa15.56■□□□□ 0.08
CTDSPL2-208ENST00000559793 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
CTDSPL2-208ENST00000559793 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
CTDSPL2-208ENST00000559793 SPDYE2Q495Y8 402 aa15.51■□□□□ 0.07
CTDSPL2-208ENST00000559793 WIZO95785 1651 aa15.48■□□□□ 0.07
CTDSPL2-208ENST00000559793 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
CTDSPL2-208ENST00000559793 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
CTDSPL2-208ENST00000559793 WDR62O43379 1518 aa15.43■□□□□ 0.06
CTDSPL2-208ENST00000559793 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
CTDSPL2-208ENST00000559793 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
CTDSPL2-208ENST00000559793 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
CTDSPL2-208ENST00000559793 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
CTDSPL2-208ENST00000559793 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 378.1 ms