RNA–Protein interactions for RNA: ENST00000497959.5

MCCC1-213, Transcript of methylcrotonoyl-CoA carboxylase 1, humanhuman

TSL 2

Gene MCCC1, Length 2,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCCC1-213ENST00000497959 NISCHQ9Y2I1 1504 aa15.85■□□□□ 0.13
MCCC1-213ENST00000497959 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
MCCC1-213ENST00000497959 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.2
MCCC1-213ENST00000497959 HRCP23327 699 aa13.6□□□□□ -0.23
MCCC1-213ENST00000497959 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
MCCC1-213ENST00000497959 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
MCCC1-213ENST00000497959 PCGF6Q9BYE7 350 aa13.46□□□□□ -0.25
MCCC1-213ENST00000497959 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
MCCC1-213ENST00000497959 PPARGC1BQ86YN6 1023 aaKnown RBP13.42□□□□□ -0.26
MCCC1-213ENST00000497959 ZCCHC6Q5VYS8 1495 aaKnown RBP13.41□□□□□ -0.26
MCCC1-213ENST00000497959 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
MCCC1-213ENST00000497959 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
MCCC1-213ENST00000497959 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
MCCC1-213ENST00000497959 TRIM26Q12899 539 aaPredicted RBP13□□□□□ -0.33
MCCC1-213ENST00000497959 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
MCCC1-213ENST00000497959 ZEB1P37275 1124 aaPredicted RBP12.79□□□□□ -0.36
MCCC1-213ENST00000497959 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
MCCC1-213ENST00000497959 FAM9AQ8IZU1 332 aaPredicted RBP12.77□□□□□ -0.36
MCCC1-213ENST00000497959 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
MCCC1-213ENST00000497959 TRIM41Q8WV44 630 aa12.71□□□□□ -0.38
MCCC1-213ENST00000497959 ABCC9O60706 1549 aa12.65□□□□□ -0.38
MCCC1-213ENST00000497959 SCRIBQ14160 1630 aa12.63□□□□□ -0.39
MCCC1-213ENST00000497959 RSF1Q96T23 1441 aaPredicted RBP12.57□□□□□ -0.4
MCCC1-213ENST00000497959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
MCCC1-213ENST00000497959 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
MCCC1-213ENST00000497959 ACIN1Q9UKV3 1341 aaKnown RBP12.52□□□□□ -0.41
MCCC1-213ENST00000497959 NACADO15069 1562 aa12.51□□□□□ -0.41
MCCC1-213ENST00000497959 RB1CC1Q8TDY2 1594 aa12.5□□□□□ -0.41
MCCC1-213ENST00000497959 CCER1Q8TC90 406 aaPredicted RBP12.49□□□□□ -0.41
MCCC1-213ENST00000497959 GTF3C3Q9Y5Q9 886 aa12.44□□□□□ -0.42
MCCC1-213ENST00000497959 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
MCCC1-213ENST00000497959 DIEXFQ68CQ4 756 aaKnown RBP12.4□□□□□ -0.42
MCCC1-213ENST00000497959 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
MCCC1-213ENST00000497959 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
MCCC1-213ENST00000497959 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
MCCC1-213ENST00000497959 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
MCCC1-213ENST00000497959 WIZO95785 1651 aa12.25□□□□□ -0.45
MCCC1-213ENST00000497959 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
MCCC1-213ENST00000497959 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
MCCC1-213ENST00000497959 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
MCCC1-213ENST00000497959 MYT1Q01538 1121 aa12.19□□□□□ -0.46
MCCC1-213ENST00000497959 CEP162Q5TB80 1403 aa12.14□□□□□ -0.47
MCCC1-213ENST00000497959 MIER1Q8N108 512 aa12.13□□□□□ -0.47
MCCC1-213ENST00000497959 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
MCCC1-213ENST00000497959 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
MCCC1-213ENST00000497959 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
MCCC1-213ENST00000497959 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
MCCC1-213ENST00000497959 SMARCA4P51532 1647 aa12.1□□□□□ -0.47
MCCC1-213ENST00000497959 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
MCCC1-213ENST00000497959 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.47
MCCC1-213ENST00000497959 SOGA1O94964 1423 aa12.08□□□□□ -0.48
MCCC1-213ENST00000497959 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
MCCC1-213ENST00000497959 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
MCCC1-213ENST00000497959 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
MCCC1-213ENST00000497959 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.48
MCCC1-213ENST00000497959 RUSC2Q8N2Y8 1516 aa12.02□□□□□ -0.49
MCCC1-213ENST00000497959 SMARCA2P51531 1590 aa12□□□□□ -0.49
MCCC1-213ENST00000497959 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
MCCC1-213ENST00000497959 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
MCCC1-213ENST00000497959 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
MCCC1-213ENST00000497959 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
MCCC1-213ENST00000497959 EEA1Q15075 1411 aa11.89□□□□□ -0.51
MCCC1-213ENST00000497959 SUPT16HQ9Y5B9 1047 aaKnown RBP11.86□□□□□ -0.51
MCCC1-213ENST00000497959 APLP2Q06481 763 aa11.85□□□□□ -0.51
MCCC1-213ENST00000497959 CLIP1P30622 1438 aa11.84□□□□□ -0.51
MCCC1-213ENST00000497959 VPS8Q8N3P4 1428 aa11.79□□□□□ -0.52
MCCC1-213ENST00000497959 CEP164Q9UPV0 1460 aa11.78□□□□□ -0.52
MCCC1-213ENST00000497959 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
MCCC1-213ENST00000497959 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
MCCC1-213ENST00000497959 DHX57Q6P158 1386 aaKnown RBP11.75□□□□□ -0.53
MCCC1-213ENST00000497959 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
MCCC1-213ENST00000497959 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
MCCC1-213ENST00000497959 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
MCCC1-213ENST00000497959 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
MCCC1-213ENST00000497959 BCANQ96GW7 911 aa11.72□□□□□ -0.53
MCCC1-213ENST00000497959 CLSPNQ9HAW4 1339 aa11.71□□□□□ -0.53
MCCC1-213ENST00000497959 KIF21BO75037 1637 aa11.71□□□□□ -0.54
MCCC1-213ENST00000497959 KANK4Q5T7N3 995 aaPredicted RBP11.69□□□□□ -0.54
MCCC1-213ENST00000497959 ANP32EQ9BTT0 268 aa11.69□□□□□ -0.54
MCCC1-213ENST00000497959 ITGAEP38570 1179 aa11.67□□□□□ -0.54
MCCC1-213ENST00000497959 FKBP8Q14318 412 aa11.61□□□□□ -0.55
MCCC1-213ENST00000497959 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
MCCC1-213ENST00000497959 ARAP1Q96P48 1450 aa11.58□□□□□ -0.55
MCCC1-213ENST00000497959 TOP2BQ02880 1626 aa11.58□□□□□ -0.56
MCCC1-213ENST00000497959 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
MCCC1-213ENST00000497959 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
MCCC1-213ENST00000497959 BCL11AQ9H165 835 aa11.57□□□□□ -0.56
MCCC1-213ENST00000497959 BIVM-ERCC5R4GMW8 1640 aa11.56□□□□□ -0.56
MCCC1-213ENST00000497959 CCNB3Q8WWL7 1395 aa11.53□□□□□ -0.56
MCCC1-213ENST00000497959 RRBP1Q9P2E9 1410 aaKnown RBP11.53□□□□□ -0.56
MCCC1-213ENST00000497959 HIRIP3Q9BW71 556 aaPredicted RBP11.53□□□□□ -0.56
MCCC1-213ENST00000497959 SIN3AQ96ST3 1273 aa11.52□□□□□ -0.57
MCCC1-213ENST00000497959 RAB3GAP2Q9H2M9 1393 aa11.51□□□□□ -0.57
MCCC1-213ENST00000497959 TRIM52Q96A61 297 aa11.51□□□□□ -0.57
MCCC1-213ENST00000497959 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
MCCC1-213ENST00000497959 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
MCCC1-213ENST00000497959 NEFLP07196 543 aa11.49□□□□□ -0.57
MCCC1-213ENST00000497959 CUX2O14529 1486 aa11.48□□□□□ -0.57
MCCC1-213ENST00000497959 CUX1P39880 1505 aa11.47□□□□□ -0.57
MCCC1-213ENST00000497959 MAPKBP1O60336 1514 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms