RNA–Protein interactions for RNA: ENST00000531849.5

XRRA1-215, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 2

Gene XRRA1, Length 5,084 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-215ENST00000531849 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
XRRA1-215ENST00000531849 NISCHQ9Y2I1 1504 aa22.65■■□□□ 1.22
XRRA1-215ENST00000531849 SUPT5HO00267 1087 aaKnown RBP21.25■□□□□ 0.99
XRRA1-215ENST00000531849 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
XRRA1-215ENST00000531849 PELP1Q8IZL8 1130 aaKnown RBP20.31■□□□□ 0.84
XRRA1-215ENST00000531849 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
XRRA1-215ENST00000531849 FAM9AQ8IZU1 332 aaPredicted RBP20.25■□□□□ 0.83
XRRA1-215ENST00000531849 APLP2Q06481 763 aa20.06■□□□□ 0.8
XRRA1-215ENST00000531849 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
XRRA1-215ENST00000531849 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
XRRA1-215ENST00000531849 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
XRRA1-215ENST00000531849 RANGAP1P46060 587 aaPredicted RBP19.61■□□□□ 0.73
XRRA1-215ENST00000531849 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
XRRA1-215ENST00000531849 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
XRRA1-215ENST00000531849 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
XRRA1-215ENST00000531849 ABCC9O60706 1549 aa19.54■□□□□ 0.72
XRRA1-215ENST00000531849 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
XRRA1-215ENST00000531849 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
XRRA1-215ENST00000531849 MYT1Q01538 1121 aa19.43■□□□□ 0.7
XRRA1-215ENST00000531849 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
XRRA1-215ENST00000531849 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
XRRA1-215ENST00000531849 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
XRRA1-215ENST00000531849 ERICH6Q7L0X2 663 aa19.24■□□□□ 0.67
XRRA1-215ENST00000531849 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
XRRA1-215ENST00000531849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
XRRA1-215ENST00000531849 HRCP23327 699 aa19.1■□□□□ 0.65
XRRA1-215ENST00000531849 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
XRRA1-215ENST00000531849 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
XRRA1-215ENST00000531849 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
XRRA1-215ENST00000531849 NEFLP07196 543 aa19.03■□□□□ 0.64
XRRA1-215ENST00000531849 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
XRRA1-215ENST00000531849 YTHDC1Q96MU7 727 aaKnown RBP18.76■□□□□ 0.59
XRRA1-215ENST00000531849 FBLN2P98095 1184 aa18.71■□□□□ 0.59
XRRA1-215ENST00000531849 ITGAEP38570 1179 aa18.63■□□□□ 0.57
XRRA1-215ENST00000531849 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
XRRA1-215ENST00000531849 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
XRRA1-215ENST00000531849 DAXXQ9UER7 740 aaPredicted RBP18.4■□□□□ 0.54
XRRA1-215ENST00000531849 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
XRRA1-215ENST00000531849 DIEXFQ68CQ4 756 aaKnown RBP18.32■□□□□ 0.52
XRRA1-215ENST00000531849 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
XRRA1-215ENST00000531849 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
XRRA1-215ENST00000531849 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
XRRA1-215ENST00000531849 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
XRRA1-215ENST00000531849 NPM1P06748 294 aaKnown RBP eCLIP18.21■□□□□ 0.51
XRRA1-215ENST00000531849 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
XRRA1-215ENST00000531849 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
XRRA1-215ENST00000531849 TRIM52Q96A61 297 aa18.19■□□□□ 0.5
XRRA1-215ENST00000531849 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
XRRA1-215ENST00000531849 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
XRRA1-215ENST00000531849 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
XRRA1-215ENST00000531849 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
XRRA1-215ENST00000531849 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
XRRA1-215ENST00000531849 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
XRRA1-215ENST00000531849 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
XRRA1-215ENST00000531849 BCANQ96GW7 911 aa18■□□□□ 0.47
XRRA1-215ENST00000531849 ZNF777Q9ULD5 760 aaPredicted RBP18■□□□□ 0.47
XRRA1-215ENST00000531849 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
XRRA1-215ENST00000531849 NACADO15069 1562 aa17.99■□□□□ 0.47
XRRA1-215ENST00000531849 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
XRRA1-215ENST00000531849 ZNF316A6NFI3 1004 aaPredicted RBP17.97■□□□□ 0.47
XRRA1-215ENST00000531849 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
XRRA1-215ENST00000531849 ANP32CO43423 234 aa17.9■□□□□ 0.46
XRRA1-215ENST00000531849 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
XRRA1-215ENST00000531849 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
XRRA1-215ENST00000531849 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
XRRA1-215ENST00000531849 ACIN1Q9UKV3 1341 aaKnown RBP17.85■□□□□ 0.45
XRRA1-215ENST00000531849 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
XRRA1-215ENST00000531849 STAG3Q9UJ98 1225 aa17.8■□□□□ 0.44
XRRA1-215ENST00000531849 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
XRRA1-215ENST00000531849 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
XRRA1-215ENST00000531849 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
XRRA1-215ENST00000531849 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
XRRA1-215ENST00000531849 CLIP1P30622 1438 aa17.67■□□□□ 0.42
XRRA1-215ENST00000531849 MROH2BQ7Z745 1585 aa17.65■□□□□ 0.42
XRRA1-215ENST00000531849 TSPY4P0CV99 314 aa17.65■□□□□ 0.42
XRRA1-215ENST00000531849 TSPY10P0CW01 314 aa17.65■□□□□ 0.42
XRRA1-215ENST00000531849 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
XRRA1-215ENST00000531849 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
XRRA1-215ENST00000531849 GOLGA3Q08378 1498 aa17.6■□□□□ 0.41
XRRA1-215ENST00000531849 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
XRRA1-215ENST00000531849 NEFMP07197 916 aa17.59■□□□□ 0.41
XRRA1-215ENST00000531849 EEA1Q15075 1411 aa17.58■□□□□ 0.41
XRRA1-215ENST00000531849 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
XRRA1-215ENST00000531849 PLEKHD1A6NEE1 506 aa17.57■□□□□ 0.4
XRRA1-215ENST00000531849 MTUS2Q5JR59 1369 aa17.55■□□□□ 0.4
XRRA1-215ENST00000531849 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
XRRA1-215ENST00000531849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.47e-6■■□□□ 13.5
XRRA1-215ENST00000531849 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
XRRA1-215ENST00000531849 SOGA1O94964 1423 aa17.54■□□□□ 0.4
XRRA1-215ENST00000531849 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
XRRA1-215ENST00000531849 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
XRRA1-215ENST00000531849 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
XRRA1-215ENST00000531849 CHIC2Q9UKJ5 165 aa17.48■□□□□ 0.39
XRRA1-215ENST00000531849 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
XRRA1-215ENST00000531849 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
XRRA1-215ENST00000531849 MIER1Q8N108 512 aa17.46■□□□□ 0.38
XRRA1-215ENST00000531849 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
XRRA1-215ENST00000531849 WIZO95785 1651 aa17.45■□□□□ 0.38
XRRA1-215ENST00000531849 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
XRRA1-215ENST00000531849 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms