Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 AC074183.2-201ENST00000623112 922 ntBASIC19.47■□□□□ 0.71
HMG20AQ9NP66 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.47■□□□□ 0.71
HMG20AQ9NP66 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 TSPY13P-201ENST00000338964 914 ntBASIC19.46■□□□□ 0.71
HMG20AQ9NP66 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMG20AQ9NP66 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 AC087742.1-201ENST00000575880 1738 ntBASIC19.45■□□□□ 0.7
HMG20AQ9NP66 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMG20AQ9NP66 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMG20AQ9NP66 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMG20AQ9NP66 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMG20AQ9NP66 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 AL022069.1-201ENST00000568025 1636 ntBASIC19.41■□□□□ 0.7
HMG20AQ9NP66 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMG20AQ9NP66 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms