Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PHGDH-204ENST00000469443 653 ntTSL 218.87■□□□□ 0.616e-10■■■■□ 20.7
SND1Q7KZF4 LGALS1-207ENST00000489315 516 ntTSL 319.05■□□□□ 0.643e-10■■■■□ 20.7
SND1Q7KZF4 LGALS1-205ENST00000472321 546 ntTSL 219.05■□□□□ 0.643e-10■■■■□ 20.7
SND1Q7KZF4 LGALS1-202ENST00000425542 637 ntTSL 319.05■□□□□ 0.643e-10■■■■□ 20.7
SND1Q7KZF4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.493e-10■■■■□ 20.7
SND1Q7KZF4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.288e-8■■■■□ 20.7
SND1Q7KZF4 LGALS1-203ENST00000454173 331 ntTSL 514.96□□□□□ -0.013e-10■■■■□ 20.7
SND1Q7KZF4 ECE1-213ENST00000531334 653 ntTSL 210.84□□□□□ -0.671e-12■■■■□ 20.7
SND1Q7KZF4 UBAC2-201ENST00000355700 748 ntTSL 317.79■□□□□ 0.443e-8■■■■□ 20.7
SND1Q7KZF4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.383e-8■■■■□ 20.7
SND1Q7KZF4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.32■□□□□ 0.363e-8■■■■□ 20.7
SND1Q7KZF4 UBAC2-209ENST00000474510 853 ntTSL 216.9■□□□□ 0.33e-8■■■■□ 20.7
SND1Q7KZF4 UBAC2-211ENST00000494576 1855 ntTSL 215.98■□□□□ 0.153e-8■■■■□ 20.7
SND1Q7KZF4 UBAC2-205ENST00000460562 2350 ntTSL 215.69■□□□□ 0.13e-8■■■■□ 20.7
SND1Q7KZF4 UBAC2-208ENST00000473194 861 ntTSL 1 (best)9.21□□□□□ -0.943e-8■■■■□ 20.7
SND1Q7KZF4 UBAC2-210ENST00000480738 1017 ntTSL 1 (best)9.19□□□□□ -0.943e-8■■■■□ 20.7
SND1Q7KZF4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.097e-12■■■■□ 20.7
SND1Q7KZF4 EMC7-202ENST00000527822 581 ntTSL 218.26■□□□□ 0.517e-12■■■■□ 20.7
SND1Q7KZF4 EMC7-203ENST00000528949 506 ntTSL 35.24□□□□□ -1.577e-12■■■■□ 20.7
SND1Q7KZF4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.071e-8■■■■□ 20.7
SND1Q7KZF4 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC12.29□□□□□ -0.447e-8■■■■□ 20.6
SND1Q7KZF4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.52□□□□□ -1.377e-8■■■■□ 20.6
SND1Q7KZF4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.957e-8■■■■□ 20.6
SND1Q7KZF4 EMC1-209ENST00000486238 425 ntTSL 35.79□□□□□ -1.488e-9■■■■□ 20.6
SND1Q7KZF4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.627e-7■■■■□ 20.6
SND1Q7KZF4 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.267e-7■■■■□ 20.6
SND1Q7KZF4 SLC39A14-209ENST00000520644 377 ntTSL 520.54■□□□□ 0.884e-10■■■■□ 20.6
SND1Q7KZF4 SLC39A14-212ENST00000524285 570 ntTSL 418.24■□□□□ 0.514e-10■■■■□ 20.6
SND1Q7KZF4 CTNNB1-212ENST00000471014 607 ntTSL 313.25□□□□□ -0.298e-9■■■■□ 20.6
SND1Q7KZF4 NCSTN-214ENST00000491390 592 ntTSL 311.43□□□□□ -0.585e-7■■■■□ 20.6
SND1Q7KZF4 NUCB1-209ENST00000465524 839 ntTSL 516.21■□□□□ 0.191e-11■■■■□ 20.6
SND1Q7KZF4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.87■□□□□ 0.611e-7■■■■□ 20.6
SND1Q7KZF4 CES2-205ENST00000563988 371 ntTSL 29.98□□□□□ -0.811e-7■■■■□ 20.6
SND1Q7KZF4 ATP1A1-207ENST00000479960 611 ntTSL 212.9□□□□□ -0.342e-11■■■■□ 20.6
SND1Q7KZF4 TNFRSF10B-206ENST00000520109 674 ntTSL 219.83■□□□□ 0.772e-13■■■■□ 20.6
SND1Q7KZF4 ITGA5-212ENST00000552583 568 ntTSL 214.7□□□□□ -0.067e-8■■■■□ 20.6
SND1Q7KZF4 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)8.88□□□□□ -0.992e-13■■■■□ 20.6
SND1Q7KZF4 FN1-225ENST00000494446 676 ntTSL 27.11□□□□□ -1.271e-6■■■■□ 20.6
SND1Q7KZF4 TPP1-207ENST00000524924 289 ntTSL 38.94□□□□□ -0.982e-9■■■■□ 20.6
SND1Q7KZF4 LAMB2-211ENST00000483321 408 ntTSL 311.74□□□□□ -0.532e-7■■■■□ 20.6
SND1Q7KZF4 FCGR2A-213ENST00000497474 557 ntTSL 48.92□□□□□ -0.987e-7■■■■□ 20.6
SND1Q7KZF4 SERPINE2-209ENST00000478966 680 ntTSL 27.5□□□□□ -1.212e-7■■■■□ 20.5
SND1Q7KZF4 LEPR-206ENST00000462765 2117 ntTSL 1 (best)18.73■□□□□ 0.591e-6■■■■□ 20.5
SND1Q7KZF4 PLD3-210ENST00000480030 903 ntTSL 29.55□□□□□ -0.881e-7■■■■□ 20.5
SND1Q7KZF4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.549e-8■■■■□ 20.5
SND1Q7KZF4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.69■□□□□ 0.269e-8■■■■□ 20.5
SND1Q7KZF4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.651e-10■■■■□ 20.5
SND1Q7KZF4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.46■□□□□ 0.558e-8■■■■□ 20.5
SND1Q7KZF4 DAGLB-208ENST00000482149 2378 ntTSL 218.08■□□□□ 0.488e-8■■■■□ 20.5
SND1Q7KZF4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.128e-8■■■■□ 20.5
SND1Q7KZF4 DAGLB-206ENST00000462934 2589 ntTSL 214.57□□□□□ -0.088e-8■■■■□ 20.5
SND1Q7KZF4 HSP90B1-207ENST00000550595 694 ntTSL 28.86□□□□□ -0.991e-25■■■■□ 20.5
SND1Q7KZF4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.547e-12■■■■□ 20.5
SND1Q7KZF4 MYDGF-204ENST00000599761 463 ntTSL 312.64□□□□□ -0.397e-12■■■■□ 20.5
SND1Q7KZF4 ERO1A-204ENST00000554251 555 ntTSL 516.75■□□□□ 0.271e-6■■■■□ 20.5
SND1Q7KZF4 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.396e-10■■■■□ 20.5
SND1Q7KZF4 SLC5A6-211ENST00000445802 871 ntTSL 512.04□□□□□ -0.484e-12■■■■□ 20.5
SND1Q7KZF4 SLC39A14-205ENST00000517370 839 ntTSL 313.8□□□□□ -0.23e-21■■■■□ 20.5
SND1Q7KZF4 NT5E-205ENST00000437581 738 ntTSL 310.24□□□□□ -0.773e-6■■■■□ 20.5
SND1Q7KZF4 TGFBI-203ENST00000504185 561 ntTSL 416.7■□□□□ 0.266e-9■■■■□ 20.5
SND1Q7KZF4 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.07■□□□□ 0.323e-7■■■■□ 20.5
SND1Q7KZF4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.46■□□□□ 0.233e-7■■■■□ 20.5
SND1Q7KZF4 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.063e-7■■■■□ 20.5
SND1Q7KZF4 SULF2-212ENST00000495544 1550 ntTSL 1 (best)7.68□□□□□ -1.181e-6■■■■□ 20.5
SND1Q7KZF4 TUSC2-205ENST00000462137 834 ntTSL 322.97■■□□□ 1.272e-7■■■■□ 20.5
SND1Q7KZF4 GLG1-213ENST00000567951 2918 ntTSL 1 (best)21.34■■□□□ 1.014e-8■■■■□ 20.5
SND1Q7KZF4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.394e-8■■■■□ 20.5
SND1Q7KZF4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.354e-8■■■■□ 20.5
SND1Q7KZF4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.244e-8■■■■□ 20.5
SND1Q7KZF4 GLG1-206ENST00000562090 4037 ntTSL 215.91■□□□□ 0.144e-8■■■■□ 20.5
SND1Q7KZF4 CKLF-207ENST00000534692 546 ntTSL 323.72■■□□□ 1.393e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.67■■□□□ 1.223e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.01■□□□□ 0.953e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.923e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.543e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-CMTM1-202ENST00000527845 504 ntTSL 318.09■□□□□ 0.493e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.393e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.163e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.683e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-CMTM1-201ENST00000527729 585 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.723e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-208ENST00000563092 365 ntTSL 38.63□□□□□ -1.033e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-CMTM1-203ENST00000529718 478 ntAPPRIS ALT2 TSL 28.33□□□□□ -1.083e-10■■■■□ 20.5
SND1Q7KZF4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.173e-10■■■■□ 20.5
SND1Q7KZF4 TECR-209ENST00000596953 1043 ntTSL 222.72■■□□□ 1.233e-7■■■■□ 20.4
SND1Q7KZF4 CPZ-209ENST00000515606 2464 ntTSL 1 (best)20.46■□□□□ 0.872e-6■■■■□ 20.4
SND1Q7KZF4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.842e-6■■■■□ 20.4
SND1Q7KZF4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.722e-6■■■■□ 20.4
SND1Q7KZF4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.91■□□□□ 0.622e-6■■■■□ 20.4
SND1Q7KZF4 GPR78-207ENST00000514302 4944 ntTSL 215.64■□□□□ 0.092e-6■■■■□ 20.4
SND1Q7KZF4 ENTPD2-204ENST00000469106 868 ntTSL 520.63■□□□□ 0.893e-6■■■■□ 20.4
SND1Q7KZF4 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.325e-7■■■■□ 20.4
SND1Q7KZF4 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.415e-7■■■■□ 20.4
SND1Q7KZF4 CD151-210ENST00000526661 894 ntTSL 223.74■■□□□ 1.394e-7■■■■□ 20.4
SND1Q7KZF4 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC13.87□□□□□ -0.191e-9■■■■□ 20.4
SND1Q7KZF4 NAGPA-212ENST00000567739 583 ntTSL 217.18■□□□□ 0.344e-7■■■■□ 20.4
SND1Q7KZF4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.855e-7■■■■□ 20.4
SND1Q7KZF4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.64■□□□□ 0.095e-7■■■■□ 20.4
SND1Q7KZF4 ITGA6-203ENST00000409532 3544 ntTSL 2 BASIC12.47□□□□□ -0.415e-7■■■■□ 20.4
SND1Q7KZF4 ITGA6-207ENST00000458358 3261 ntTSL 5 BASIC11.09□□□□□ -0.635e-7■■■■□ 20.4
SND1Q7KZF4 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC10.43□□□□□ -0.745e-7■■■■□ 20.4
Retrieved 100 of 13,567 protein–RNA pairs in 105.7 ms