RNA–Protein interactions for RNA: ENST00000471014.1

CTNNB1-212, Transcript of catenin beta 1, humanhuman

TSL 3

Gene CTNNB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-212ENST00000471014 NISCHQ9Y2I1 1504 aa32.09■■■□□ 2.73
CTNNB1-212ENST00000471014 ABCC9O60706 1549 aa28.94■■■□□ 2.22
CTNNB1-212ENST00000471014 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
CTNNB1-212ENST00000471014 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
CTNNB1-212ENST00000471014 DCAF8L2P0C7V8 631 aa27.3■■□□□ 1.96
CTNNB1-212ENST00000471014 NACADO15069 1562 aa27.22■■□□□ 1.95
CTNNB1-212ENST00000471014 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
CTNNB1-212ENST00000471014 PABPN1Q86U42 306 aaKnown RBP eCLIP26.98■■□□□ 1.911e-9■□□□□ 10.5
CTNNB1-212ENST00000471014 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
CTNNB1-212ENST00000471014 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
CTNNB1-212ENST00000471014 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
CTNNB1-212ENST00000471014 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
CTNNB1-212ENST00000471014 DCAF1Q9Y4B6 1507 aa26.43■■□□□ 1.82
CTNNB1-212ENST00000471014 SCRIBQ14160 1630 aa26.33■■□□□ 1.81
CTNNB1-212ENST00000471014 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
CTNNB1-212ENST00000471014 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
CTNNB1-212ENST00000471014 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
CTNNB1-212ENST00000471014 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
CTNNB1-212ENST00000471014 NCAPD3P42695 1498 aa25.14■■□□□ 1.61
CTNNB1-212ENST00000471014 ATAD2BQ9ULI0 1458 aa25.09■■□□□ 1.61
CTNNB1-212ENST00000471014 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
CTNNB1-212ENST00000471014 ERCC6Q03468 1493 aa25■■□□□ 1.59
CTNNB1-212ENST00000471014 SMARCA2P51531 1590 aa25■■□□□ 1.59
CTNNB1-212ENST00000471014 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
CTNNB1-212ENST00000471014 DNAJC5Q9H3Z4 198 aa24.92■■□□□ 1.58
CTNNB1-212ENST00000471014 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
CTNNB1-212ENST00000471014 BAZ1BQ9UIG0 1483 aaKnown RBP24.88■■□□□ 1.57
CTNNB1-212ENST00000471014 CUX2O14529 1486 aa24.86■■□□□ 1.57
CTNNB1-212ENST00000471014 NESP48681 1621 aa24.85■■□□□ 1.57
CTNNB1-212ENST00000471014 MROH2BQ7Z745 1585 aa24.77■■□□□ 1.56
CTNNB1-212ENST00000471014 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
CTNNB1-212ENST00000471014 LAMC3Q9Y6N6 1575 aa24.57■■□□□ 1.52
CTNNB1-212ENST00000471014 THOC2Q8NI27 1593 aaKnown RBP24.53■■□□□ 1.52
CTNNB1-212ENST00000471014 WIZO95785 1651 aa24.47■■□□□ 1.51
CTNNB1-212ENST00000471014 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
CTNNB1-212ENST00000471014 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
CTNNB1-212ENST00000471014 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
CTNNB1-212ENST00000471014 MRC2Q9UBG0 1479 aa24.27■■□□□ 1.48
CTNNB1-212ENST00000471014 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
CTNNB1-212ENST00000471014 WDR62O43379 1518 aa24.19■■□□□ 1.46
CTNNB1-212ENST00000471014 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
CTNNB1-212ENST00000471014 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
CTNNB1-212ENST00000471014 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
CTNNB1-212ENST00000471014 CFTRP13569 1480 aa24.1■■□□□ 1.45
CTNNB1-212ENST00000471014 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
CTNNB1-212ENST00000471014 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
CTNNB1-212ENST00000471014 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
CTNNB1-212ENST00000471014 PRDM2Q13029 1718 aa23.8■■□□□ 1.4
CTNNB1-212ENST00000471014 OSCARQ8IYS5 282 aa23.78■■□□□ 1.4
CTNNB1-212ENST00000471014 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
CTNNB1-212ENST00000471014 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
CTNNB1-212ENST00000471014 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
CTNNB1-212ENST00000471014 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
CTNNB1-212ENST00000471014 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
CTNNB1-212ENST00000471014 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
CTNNB1-212ENST00000471014 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.351e-13■■■□□ 14.9
CTNNB1-212ENST00000471014 RIMBP3CA6NJZ7 1639 aa23.46■■□□□ 1.35
CTNNB1-212ENST00000471014 RIMBP3BA6NNM3 1639 aa23.46■■□□□ 1.35
CTNNB1-212ENST00000471014 RIMBP3Q9UFD9 1639 aa23.46■■□□□ 1.35
CTNNB1-212ENST00000471014 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
CTNNB1-212ENST00000471014 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
CTNNB1-212ENST00000471014 FBLN2P98095 1184 aa23.41■■□□□ 1.34
CTNNB1-212ENST00000471014 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
CTNNB1-212ENST00000471014 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
CTNNB1-212ENST00000471014 SOGA1O94964 1423 aa23.35■■□□□ 1.33
CTNNB1-212ENST00000471014 CHD1O14646 1710 aa23.35■■□□□ 1.33
CTNNB1-212ENST00000471014 TDRD9Q8NDG6 1382 aaKnown RBP23.35■■□□□ 1.33
CTNNB1-212ENST00000471014 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
CTNNB1-212ENST00000471014 CYB5RLQ6IPT4 315 aa23.29■■□□□ 1.32
CTNNB1-212ENST00000471014 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
CTNNB1-212ENST00000471014 CUX1P39880 1505 aa23.27■■□□□ 1.32
CTNNB1-212ENST00000471014 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
CTNNB1-212ENST00000471014 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
CTNNB1-212ENST00000471014 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
CTNNB1-212ENST00000471014 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
CTNNB1-212ENST00000471014 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
CTNNB1-212ENST00000471014 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
CTNNB1-212ENST00000471014 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.29
CTNNB1-212ENST00000471014 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
CTNNB1-212ENST00000471014 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
CTNNB1-212ENST00000471014 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
CTNNB1-212ENST00000471014 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
CTNNB1-212ENST00000471014 PBRM1Q86U86 1689 aa23.02■■□□□ 1.28
CTNNB1-212ENST00000471014 ABCA10Q8WWZ4 1543 aa22.99■■□□□ 1.27
CTNNB1-212ENST00000471014 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
CTNNB1-212ENST00000471014 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
CTNNB1-212ENST00000471014 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
CTNNB1-212ENST00000471014 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
CTNNB1-212ENST00000471014 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
CTNNB1-212ENST00000471014 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
CTNNB1-212ENST00000471014 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
CTNNB1-212ENST00000471014 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
CTNNB1-212ENST00000471014 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
CTNNB1-212ENST00000471014 NUP160Q12769 1436 aa22.74■■□□□ 1.23
CTNNB1-212ENST00000471014 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
CTNNB1-212ENST00000471014 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
CTNNB1-212ENST00000471014 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
CTNNB1-212ENST00000471014 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
CTNNB1-212ENST00000471014 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
CTNNB1-212ENST00000471014 KIF27Q86VH2 1401 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms