RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
NCSTN-214ENST00000491390 ABCC9O60706 1549 aa26.49■■□□□ 1.83
NCSTN-214ENST00000491390 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
NCSTN-214ENST00000491390 DNAJC5BQ9UF47 199 aa25.56■■□□□ 1.68
NCSTN-214ENST00000491390 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
NCSTN-214ENST00000491390 NACADO15069 1562 aa24.63■■□□□ 1.53
NCSTN-214ENST00000491390 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
NCSTN-214ENST00000491390 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
NCSTN-214ENST00000491390 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.49
NCSTN-214ENST00000491390 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
NCSTN-214ENST00000491390 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
NCSTN-214ENST00000491390 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
NCSTN-214ENST00000491390 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
NCSTN-214ENST00000491390 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
NCSTN-214ENST00000491390 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
NCSTN-214ENST00000491390 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
NCSTN-214ENST00000491390 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
NCSTN-214ENST00000491390 ZCCHC6Q5VYS8 1495 aaKnown RBP23.47■■□□□ 1.35
NCSTN-214ENST00000491390 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
NCSTN-214ENST00000491390 CUX2O14529 1486 aa23.21■■□□□ 1.31
NCSTN-214ENST00000491390 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
NCSTN-214ENST00000491390 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
NCSTN-214ENST00000491390 NESP48681 1621 aa22.59■■□□□ 1.21
NCSTN-214ENST00000491390 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
NCSTN-214ENST00000491390 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
NCSTN-214ENST00000491390 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
NCSTN-214ENST00000491390 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
NCSTN-214ENST00000491390 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
NCSTN-214ENST00000491390 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
NCSTN-214ENST00000491390 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.17
NCSTN-214ENST00000491390 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
NCSTN-214ENST00000491390 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
NCSTN-214ENST00000491390 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
NCSTN-214ENST00000491390 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
NCSTN-214ENST00000491390 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
NCSTN-214ENST00000491390 WDR62O43379 1518 aa22.1■■□□□ 1.13
NCSTN-214ENST00000491390 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
NCSTN-214ENST00000491390 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
NCSTN-214ENST00000491390 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
NCSTN-214ENST00000491390 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
NCSTN-214ENST00000491390 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
NCSTN-214ENST00000491390 RIMBP3CA6NJZ7 1639 aa21.79■■□□□ 1.08
NCSTN-214ENST00000491390 RIMBP3BA6NNM3 1639 aa21.79■■□□□ 1.08
NCSTN-214ENST00000491390 RIMBP3Q9UFD9 1639 aa21.79■■□□□ 1.08
NCSTN-214ENST00000491390 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
NCSTN-214ENST00000491390 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
NCSTN-214ENST00000491390 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
NCSTN-214ENST00000491390 CFTRP13569 1480 aa21.64■■□□□ 1.05
NCSTN-214ENST00000491390 WIZO95785 1651 aa21.57■■□□□ 1.04
NCSTN-214ENST00000491390 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
NCSTN-214ENST00000491390 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
NCSTN-214ENST00000491390 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
NCSTN-214ENST00000491390 ARAP1Q96P48 1450 aa21.41■■□□□ 1.02
NCSTN-214ENST00000491390 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
NCSTN-214ENST00000491390 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
NCSTN-214ENST00000491390 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
NCSTN-214ENST00000491390 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
NCSTN-214ENST00000491390 PRDM2Q13029 1718 aa21.29■■□□□ 1
NCSTN-214ENST00000491390 TOPBP1Q92547 1522 aa21.26■□□□□ 0.99
NCSTN-214ENST00000491390 CHD1O14646 1710 aa21.25■□□□□ 0.99
NCSTN-214ENST00000491390 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
NCSTN-214ENST00000491390 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
NCSTN-214ENST00000491390 ABCC8Q09428 1581 aa21.14■□□□□ 0.98
NCSTN-214ENST00000491390 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.982e-7■■■■■ 34.1
NCSTN-214ENST00000491390 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
NCSTN-214ENST00000491390 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
NCSTN-214ENST00000491390 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
NCSTN-214ENST00000491390 FBLN2P98095 1184 aa21.01■□□□□ 0.95
NCSTN-214ENST00000491390 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
NCSTN-214ENST00000491390 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
NCSTN-214ENST00000491390 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
NCSTN-214ENST00000491390 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
NCSTN-214ENST00000491390 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
NCSTN-214ENST00000491390 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
NCSTN-214ENST00000491390 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
NCSTN-214ENST00000491390 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
NCSTN-214ENST00000491390 SOGA1O94964 1423 aa20.83■□□□□ 0.93
NCSTN-214ENST00000491390 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
NCSTN-214ENST00000491390 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
NCSTN-214ENST00000491390 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
NCSTN-214ENST00000491390 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
NCSTN-214ENST00000491390 ERCC6L2Q5T890 1561 aa20.67■□□□□ 0.9
NCSTN-214ENST00000491390 CUX1P39880 1505 aa20.63■□□□□ 0.89
NCSTN-214ENST00000491390 PBRM1Q86U86 1689 aa20.62■□□□□ 0.89
NCSTN-214ENST00000491390 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
NCSTN-214ENST00000491390 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
NCSTN-214ENST00000491390 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
NCSTN-214ENST00000491390 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
NCSTN-214ENST00000491390 ILDR1Q86SU0 546 aaPredicted RBP20.53■□□□□ 0.88
NCSTN-214ENST00000491390 NUP160Q12769 1436 aa20.53■□□□□ 0.88
NCSTN-214ENST00000491390 GRIN2AQ12879 1464 aa20.52■□□□□ 0.88
NCSTN-214ENST00000491390 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
NCSTN-214ENST00000491390 KDM4FA0A1W2PPD8 638 aa20.45■□□□□ 0.86
NCSTN-214ENST00000491390 ADAMTS12P58397 1594 aa20.43■□□□□ 0.86
NCSTN-214ENST00000491390 ABCC10Q5T3U5 1492 aa20.42■□□□□ 0.86
NCSTN-214ENST00000491390 MAPKBP1O60336 1514 aa20.36■□□□□ 0.85
NCSTN-214ENST00000491390 DIP2BQ9P265 1576 aa20.35■□□□□ 0.85
NCSTN-214ENST00000491390 FHAD1B1AJZ9 1412 aa20.31■□□□□ 0.84
NCSTN-214ENST00000491390 FAM69CQ0P6D2 419 aa20.31■□□□□ 0.84
NCSTN-214ENST00000491390 KDM6BO15054 1643 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms