Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.62□□□□□ -0.077e-8■■■□□ 18.6
LSM11P83369 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.367e-8■■■□□ 18.6
LSM11P83369 SSFA2-209ENST00000467172 860 ntTSL 513.99□□□□□ -0.174e-11■■■□□ 18.6
LSM11P83369 SSFA2-207ENST00000451836 747 ntAPPRIS ALT2 TSL 313.69□□□□□ -0.224e-11■■■□□ 18.6
LSM11P83369 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.954e-11■■■□□ 18.6
LSM11P83369 SSFA2-213ENST00000491720 6473 ntTSL 25.77□□□□□ -1.494e-11■■■□□ 18.6
LSM11P83369 PIDD1-209ENST00000531286 1937 ntTSL 218.35■□□□□ 0.534e-8■■■□□ 18.6
LSM11P83369 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.54□□□□□ -0.084e-8■■■□□ 18.6
LSM11P83369 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.144e-8■■■□□ 18.6
LSM11P83369 PIDD1-206ENST00000527812 481 ntTSL 314.17□□□□□ -0.144e-8■■■□□ 18.6
LSM11P83369 PIDD1-204ENST00000525028 3175 ntTSL 1 (best)13.27□□□□□ -0.294e-8■■■□□ 18.6
LSM11P83369 PIDD1-205ENST00000527357 4496 ntTSL 212.74□□□□□ -0.374e-8■■■□□ 18.6
LSM11P83369 PIDD1-203ENST00000524486 3917 ntTSL 212.12□□□□□ -0.474e-8■■■□□ 18.6
LSM11P83369 PIDD1-210ENST00000534525 3994 ntTSL 211.8□□□□□ -0.524e-8■■■□□ 18.6
LSM11P83369 RABL6-208ENST00000464941 3361 ntTSL 216.06■□□□□ 0.164e-13■■■□□ 18.6
LSM11P83369 RABL6-206ENST00000436380 2547 ntAPPRIS ALT2 TSL 214.35□□□□□ -0.118e-6■■■□□ 18.6
LSM11P83369 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.258e-6■■■□□ 18.6
LSM11P83369 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.643e-8■■■□□ 18.6
LSM11P83369 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.473e-8■■■□□ 18.6
LSM11P83369 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.283e-8■■■□□ 18.6
LSM11P83369 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.432e-6■■■□□ 18.5
LSM11P83369 TEPSIN-207ENST00000573295 2552 ntTSL 215.29■□□□□ 0.042e-6■■■□□ 18.5
LSM11P83369 TEPSIN-212ENST00000576090 3642 ntTSL 211.54□□□□□ -0.562e-6■■■□□ 18.5
LSM11P83369 FAM229A-202ENST00000416512 2759 ntTSL 1 (best)17.89■□□□□ 0.454e-7■■■□□ 18.5
LSM11P83369 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.88□□□□□ -1.792e-7■■■□□ 18.5
LSM11P83369 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.81■■□□□ 1.082e-6■■■□□ 18.5
LSM11P83369 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.75■□□□□ 0.912e-6■■■□□ 18.5
LSM11P83369 TBX2-AS1-204ENST00000591313 640 ntTSL 216.16■□□□□ 0.182e-6■■■□□ 18.5
LSM11P83369 TBX2-AS1-205ENST00000592009 330 ntTSL 314.64□□□□□ -0.072e-6■■■□□ 18.5
LSM11P83369 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC9.58□□□□□ -0.882e-6■■■□□ 18.5
LSM11P83369 TTC17-209ENST00000529140 1017 ntTSL 210.33□□□□□ -0.761e-10■■■□□ 18.5
LSM11P83369 RANBP1-203ENST00000411892 584 ntTSL 213.07□□□□□ -0.323e-11■■■□□ 18.5
LSM11P83369 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.26■■□□□ 1.473e-9■■■□□ 18.5
LSM11P83369 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.963e-9■■■□□ 18.5
LSM11P83369 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.943e-9■■■□□ 18.5
LSM11P83369 KLF16-202ENST00000541015 1134 ntTSL 1 (best)19.56■□□□□ 0.723e-9■■■□□ 18.5
LSM11P83369 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.713e-9■■■□□ 18.5
LSM11P83369 THAP7-208ENST00000498406 1957 ntTSL 218.39■□□□□ 0.533e-9■■■□□ 18.5
LSM11P83369 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.533e-9■■■□□ 18.5
LSM11P83369 THAP7-206ENST00000476667 1671 ntTSL 518.03■□□□□ 0.483e-9■■■□□ 18.5
LSM11P83369 LMAN2-207ENST00000514458 616 ntTSL 518.02■□□□□ 0.483e-9■■■□□ 18.5
LSM11P83369 MHENCR-201ENST00000411579 582 ntTSL 217.87■□□□□ 0.451e-8■■■□□ 18.5
LSM11P83369 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.373e-9■■■□□ 18.5
LSM11P83369 THAP7-205ENST00000471723 653 ntTSL 317.35■□□□□ 0.373e-9■■■□□ 18.5
LSM11P83369 THAP7-204ENST00000471073 1809 ntTSL 216.77■□□□□ 0.283e-9■■■□□ 18.5
LSM11P83369 LMAN2-204ENST00000504071 562 ntTSL 216.42■□□□□ 0.223e-9■■■□□ 18.5
LSM11P83369 THAP7-203ENST00000466670 1080 ntTSL 516.29■□□□□ 0.23e-9■■■□□ 18.5
LSM11P83369 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.9■□□□□ 0.141e-8■■■□□ 18.5
LSM11P83369 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.86■□□□□ 0.132e-8■■■□□ 18.5
LSM11P83369 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.033e-9■■■□□ 18.5
LSM11P83369 THAP7-207ENST00000488975 507 ntTSL 512.33□□□□□ -0.443e-9■■■□□ 18.5
LSM11P83369 PTBP1-211ENST00000587094 273 ntTSL 39.93□□□□□ -0.829e-7■■■□□ 18.5
LSM11P83369 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.62□□□□□ -0.391e-6■■■□□ 18.4
LSM11P83369 COL27A1-205ENST00000485397 463 ntTSL 516.76■□□□□ 0.278e-20■■■□□ 18.4
LSM11P83369 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.561e-6■■■□□ 18.4
LSM11P83369 CAPN12-207ENST00000597716 2198 ntTSL 218.25■□□□□ 0.511e-6■■■□□ 18.4
LSM11P83369 OAZ1-203ENST00000586054 2832 nt19.46■□□□□ 0.711e-7■■■□□ 18.4
LSM11P83369 POLD1-206ENST00000596221 412 ntTSL 215.88■□□□□ 0.135e-6■■■□□ 18.4
LSM11P83369 COL27A1-208ENST00000494780 514 ntTSL 420.27■□□□□ 0.842e-13■■■□□ 18.4
LSM11P83369 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.127e-7■■■□□ 18.4
LSM11P83369 COL16A1-206ENST00000461217 852 ntTSL 313.17□□□□□ -0.32e-6■■■□□ 18.3
LSM11P83369 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.95□□□□□ -0.024e-8■■■□□ 18.3
LSM11P83369 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.71□□□□□ -0.214e-8■■■□□ 18.3
LSM11P83369 C2orf48-202ENST00000619640 480 ntTSL 1 (best)13.58□□□□□ -0.244e-8■■■□□ 18.3
LSM11P83369 TRAF4-207ENST00000461195 787 ntTSL 219.58■□□□□ 0.721e-7■■■□□ 18.3
LSM11P83369 TRAF4-204ENST00000422344 631 ntTSL 318.99■□□□□ 0.631e-7■■■□□ 18.3
LSM11P83369 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.89■□□□□ 0.611e-7■■■□□ 18.3
LSM11P83369 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.91■□□□□ 0.461e-7■■■□□ 18.3
LSM11P83369 TRAF4-216ENST00000586813 789 ntTSL 316.88■□□□□ 0.291e-7■■■□□ 18.3
LSM11P83369 SUB1-205ENST00000504789 570 ntTSL 416.86■□□□□ 0.293e-6■■■□□ 18.3
LSM11P83369 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.221e-7■■■□□ 18.3
LSM11P83369 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC13.2□□□□□ -0.31e-7■■■□□ 18.3
LSM11P83369 SEPT7-210ENST00000492940 556 ntTSL 213.17□□□□□ -0.31e-7■■■□□ 18.3
LSM11P83369 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.331e-7■■■□□ 18.3
LSM11P83369 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.83□□□□□ -0.351e-7■■■□□ 18.3
LSM11P83369 TRAF4-210ENST00000475329 544 ntTSL 312.57□□□□□ -0.41e-7■■■□□ 18.3
LSM11P83369 TRAF4-215ENST00000584944 825 ntTSL 212.27□□□□□ -0.451e-7■■■□□ 18.3
LSM11P83369 SUB1-204ENST00000504016 509 ntTSL 311.77□□□□□ -0.533e-6■■■□□ 18.3
LSM11P83369 TRAF4-214ENST00000580073 449 ntTSL 311.71□□□□□ -0.531e-7■■■□□ 18.3
LSM11P83369 TRAF4-208ENST00000469529 788 ntTSL 211.56□□□□□ -0.561e-7■■■□□ 18.3
LSM11P83369 PUM1-215ENST00000525948 1103 ntTSL 311.37□□□□□ -0.591e-7■■■□□ 18.3
LSM11P83369 TRAF4-209ENST00000473421 585 ntTSL 311.09□□□□□ -0.631e-7■■■□□ 18.3
LSM11P83369 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.673e-6■■■□□ 18.3
LSM11P83369 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC10.72□□□□□ -0.691e-7■■■□□ 18.3
LSM11P83369 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC10.71□□□□□ -0.691e-7■■■□□ 18.3
LSM11P83369 PUM1-218ENST00000526215 586 ntTSL 210.2□□□□□ -0.781e-7■■■□□ 18.3
LSM11P83369 SUB1-208ENST00000511175 636 ntTSL 210.17□□□□□ -0.783e-6■■■□□ 18.3
LSM11P83369 TRAF4-206ENST00000454852 672 ntTSL 310.12□□□□□ -0.791e-7■■■□□ 18.3
LSM11P83369 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.853e-6■■■□□ 18.3
LSM11P83369 ANKIB1-204ENST00000439883 774 ntTSL 39.55□□□□□ -0.881e-7■■■□□ 18.3
LSM11P83369 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.93e-6■■■□□ 18.3
LSM11P83369 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC9.34□□□□□ -0.913e-6■■■□□ 18.3
LSM11P83369 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.941e-7■■■□□ 18.3
LSM11P83369 SEPT7-217ENST00000635175 1464 ntTSL 29.13□□□□□ -0.951e-7■■■□□ 18.3
LSM11P83369 SUB1-209ENST00000511615 1658 ntTSL 1 (best)8.77□□□□□ -1.013e-6■■■□□ 18.3
LSM11P83369 MTA2-203ENST00000526844 627 ntTSL 38.49□□□□□ -1.051e-7■■■□□ 18.3
LSM11P83369 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.38□□□□□ -1.071e-7■■■□□ 18.3
LSM11P83369 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.073e-6■■■□□ 18.3
LSM11P83369 SUB1-212ENST00000513013 493 ntTSL 58.01□□□□□ -1.133e-6■■■□□ 18.3
LSM11P83369 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.211e-7■■■□□ 18.3
Retrieved 100 of 11,495 protein–RNA pairs in 70.3 ms