RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 NISCHQ9Y2I1 1504 aa37.69■■■■□ 3.62
COL16A1-206ENST00000461217 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
COL16A1-206ENST00000461217 ABCC9O60706 1549 aa33.8■■■■□ 3
COL16A1-206ENST00000461217 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
COL16A1-206ENST00000461217 NACADO15069 1562 aa31.95■■■□□ 2.71
COL16A1-206ENST00000461217 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
COL16A1-206ENST00000461217 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
COL16A1-206ENST00000461217 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
COL16A1-206ENST00000461217 PABPN1Q86U42 306 aaKnown RBP eCLIP31.45■■■□□ 2.633e-6■■■■□ 20.8
COL16A1-206ENST00000461217 UNC13AQ9UPW8 1703 aa31.44■■■□□ 2.62
COL16A1-206ENST00000461217 ZCCHC6Q5VYS8 1495 aaKnown RBP31.26■■■□□ 2.59
COL16A1-206ENST00000461217 BICRAQ9NZM4 1560 aa31.19■■■□□ 2.58
COL16A1-206ENST00000461217 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
COL16A1-206ENST00000461217 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
COL16A1-206ENST00000461217 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
COL16A1-206ENST00000461217 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
COL16A1-206ENST00000461217 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
COL16A1-206ENST00000461217 CECR2Q9BXF3 1484 aa30.42■■■□□ 2.46
COL16A1-206ENST00000461217 NCAPD3P42695 1498 aa29.47■■■□□ 2.31
COL16A1-206ENST00000461217 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
COL16A1-206ENST00000461217 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
COL16A1-206ENST00000461217 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
COL16A1-206ENST00000461217 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
COL16A1-206ENST00000461217 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
COL16A1-206ENST00000461217 ERCC6Q03468 1493 aa29.21■■■□□ 2.27
COL16A1-206ENST00000461217 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
COL16A1-206ENST00000461217 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
COL16A1-206ENST00000461217 CUX2O14529 1486 aa29.08■■■□□ 2.25
COL16A1-206ENST00000461217 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
COL16A1-206ENST00000461217 NESP48681 1621 aa29.02■■■□□ 2.24
COL16A1-206ENST00000461217 DNAJC5Q9H3Z4 198 aa28.95■■■□□ 2.22
COL16A1-206ENST00000461217 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
COL16A1-206ENST00000461217 THOC2Q8NI27 1593 aaKnown RBP28.73■■■□□ 2.19
COL16A1-206ENST00000461217 WIZO95785 1651 aa28.73■■■□□ 2.19
COL16A1-206ENST00000461217 KIF21AQ7Z4S6 1674 aa28.67■■■□□ 2.18
COL16A1-206ENST00000461217 PDS5BQ9NTI5 1447 aa28.67■■■□□ 2.18
COL16A1-206ENST00000461217 CADPSQ9ULU8 1353 aa28.59■■■□□ 2.17
COL16A1-206ENST00000461217 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
COL16A1-206ENST00000461217 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
COL16A1-206ENST00000461217 TOP2AP11388 1531 aaKnown RBP28.37■■■□□ 2.13
COL16A1-206ENST00000461217 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
COL16A1-206ENST00000461217 WDR62O43379 1518 aa28.34■■■□□ 2.13
COL16A1-206ENST00000461217 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
COL16A1-206ENST00000461217 CFTRP13569 1480 aa28.27■■■□□ 2.12
COL16A1-206ENST00000461217 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
COL16A1-206ENST00000461217 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
COL16A1-206ENST00000461217 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
COL16A1-206ENST00000461217 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
COL16A1-206ENST00000461217 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
COL16A1-206ENST00000461217 OSCARQ8IYS5 282 aa27.75■■■□□ 2.03
COL16A1-206ENST00000461217 IFT140Q96RY7 1462 aa27.75■■■□□ 2.03
COL16A1-206ENST00000461217 ABCC8Q09428 1581 aa27.7■■■□□ 2.03
COL16A1-206ENST00000461217 ZNF608Q9ULD9 1512 aaPredicted RBP27.69■■■□□ 2.02
COL16A1-206ENST00000461217 DNMBPQ6XZF7 1577 aa27.68■■■□□ 2.02
COL16A1-206ENST00000461217 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
COL16A1-206ENST00000461217 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
COL16A1-206ENST00000461217 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
COL16A1-206ENST00000461217 AQRO60306 1485 aaKnown RBP eCLIP27.45■■□□□ 1.99
COL16A1-206ENST00000461217 RIMBP3CA6NJZ7 1639 aa27.41■■□□□ 1.98
COL16A1-206ENST00000461217 RIMBP3BA6NNM3 1639 aa27.41■■□□□ 1.98
COL16A1-206ENST00000461217 RIMBP3Q9UFD9 1639 aa27.41■■□□□ 1.98
COL16A1-206ENST00000461217 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
COL16A1-206ENST00000461217 CHD1O14646 1710 aa27.37■■□□□ 1.97
COL16A1-206ENST00000461217 SOGA1O94964 1423 aa27.35■■□□□ 1.97
COL16A1-206ENST00000461217 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.97
COL16A1-206ENST00000461217 ARHGEF11O15085 1522 aa27.33■■□□□ 1.97
COL16A1-206ENST00000461217 FBLN2P98095 1184 aa27.32■■□□□ 1.96
COL16A1-206ENST00000461217 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
COL16A1-206ENST00000461217 CUX1P39880 1505 aa27.3■■□□□ 1.96
COL16A1-206ENST00000461217 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
COL16A1-206ENST00000461217 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
COL16A1-206ENST00000461217 SNAPC4Q5SXM2 1469 aa27.2■■□□□ 1.95
COL16A1-206ENST00000461217 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
COL16A1-206ENST00000461217 CYB5RLQ6IPT4 315 aa27.12■■□□□ 1.93
COL16A1-206ENST00000461217 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
COL16A1-206ENST00000461217 CHMP7Q8WUX9 453 aaPredicted RBP27.09■■□□□ 1.93
COL16A1-206ENST00000461217 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
COL16A1-206ENST00000461217 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
COL16A1-206ENST00000461217 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
COL16A1-206ENST00000461217 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
COL16A1-206ENST00000461217 SYNJ2O15056 1496 aa27.02■■□□□ 1.92
COL16A1-206ENST00000461217 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
COL16A1-206ENST00000461217 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
COL16A1-206ENST00000461217 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
COL16A1-206ENST00000461217 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
COL16A1-206ENST00000461217 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.9
COL16A1-206ENST00000461217 TOP2BQ02880 1626 aa26.88■■□□□ 1.89
COL16A1-206ENST00000461217 TRHP20396 242 aaPredicted RBP26.86■■□□□ 1.89
COL16A1-206ENST00000461217 ADAMTS12P58397 1594 aa26.79■■□□□ 1.88
COL16A1-206ENST00000461217 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
COL16A1-206ENST00000461217 FHAD1B1AJZ9 1412 aa26.68■■□□□ 1.86
COL16A1-206ENST00000461217 CEP170Q5SW79 1584 aa26.67■■□□□ 1.86
COL16A1-206ENST00000461217 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
COL16A1-206ENST00000461217 NUP160Q12769 1436 aa26.65■■□□□ 1.86
COL16A1-206ENST00000461217 ERCC6L2Q5T890 1561 aa26.6■■□□□ 1.85
COL16A1-206ENST00000461217 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
COL16A1-206ENST00000461217 PRG4Q92954 1404 aaPredicted RBP26.42■■□□□ 1.82
COL16A1-206ENST00000461217 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
COL16A1-206ENST00000461217 JPH4Q96JJ6 628 aa26.38■■□□□ 1.81
COL16A1-206ENST00000461217 KIF27Q86VH2 1401 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms