Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VAMP2P63027 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.64■□□□□ 0.41
VAMP2P63027 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.64■□□□□ 0.41
VAMP2P63027 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.64■□□□□ 0.41
VAMP2P63027 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VAMP2P63027 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAMP2P63027 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.63■□□□□ 0.41
VAMP2P63027 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 RNF165-205ENST00000588679 2904 ntBASIC17.63■□□□□ 0.41
VAMP2P63027 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VAMP2P63027 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.63■□□□□ 0.41
VAMP2P63027 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.63■□□□□ 0.41
VAMP2P63027 LINC01529-204ENST00000636474 1715 ntBASIC17.63■□□□□ 0.41
VAMP2P63027 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.63■□□□□ 0.41
VAMP2P63027 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAMP2P63027 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VAMP2P63027 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VAMP2P63027 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAMP2P63027 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAMP2P63027 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VAMP2P63027 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VAMP2P63027 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.62■□□□□ 0.41
VAMP2P63027 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VAMP2P63027 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAMP2P63027 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAMP2P63027 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VAMP2P63027 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.61■□□□□ 0.41
VAMP2P63027 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.61■□□□□ 0.41
VAMP2P63027 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VAMP2P63027 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VAMP2P63027 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.61■□□□□ 0.41
VAMP2P63027 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.61■□□□□ 0.41
VAMP2P63027 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
VAMP2P63027 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VAMP2P63027 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 Z98882.1-201ENST00000622160 2253 ntBASIC17.6■□□□□ 0.41
VAMP2P63027 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.6■□□□□ 0.41
VAMP2P63027 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VAMP2P63027 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 AF131216.4-201ENST00000638924 1588 ntBASIC17.6■□□□□ 0.41
VAMP2P63027 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VAMP2P63027 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAMP2P63027 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VAMP2P63027 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VAMP2P63027 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.59■□□□□ 0.41
VAMP2P63027 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VAMP2P63027 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.59■□□□□ 0.41
VAMP2P63027 AC120024.1-201ENST00000562672 995 ntBASIC17.59■□□□□ 0.41
VAMP2P63027 AC009086.3-201ENST00000623486 1008 ntBASIC17.59■□□□□ 0.41
VAMP2P63027 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.59■□□□□ 0.41
VAMP2P63027 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAMP2P63027 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VAMP2P63027 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 701 ms