Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 PRDM16-204ENST00000463591 384 ntTSL 517.62■□□□□ 0.419e-6■■■□□ 18.8
LSM11P83369 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.92■□□□□ 0.149e-6■■■□□ 18.8
LSM11P83369 SHC2-205ENST00000590170 816 ntTSL 515.88■□□□□ 0.139e-6■■■□□ 18.8
LSM11P83369 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.37■□□□□ 0.059e-6■■■□□ 18.8
LSM11P83369 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.33■□□□□ 0.059e-6■■■□□ 18.8
LSM11P83369 LRP5-204ENST00000529481 551 ntTSL 315.15■□□□□ 0.029e-6■■■□□ 18.8
LSM11P83369 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.011e-10■■■□□ 18.8
LSM11P83369 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.063e-6■■■□□ 18.8
LSM11P83369 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.61□□□□□ -0.079e-6■■■□□ 18.8
LSM11P83369 THOC1-202ENST00000577429 751 ntTSL 214.25□□□□□ -0.131e-7■■■□□ 18.8
LSM11P83369 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.05□□□□□ -0.169e-6■■■□□ 18.8
LSM11P83369 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.179e-6■■■□□ 18.8
LSM11P83369 NR2C1-208ENST00000547594 614 ntTSL 513.82□□□□□ -0.29e-6■■■□□ 18.8
LSM11P83369 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.219e-6■■■□□ 18.8
LSM11P83369 LRP5-206ENST00000529993 5103 ntTSL 1 (best)13.63□□□□□ -0.239e-6■■■□□ 18.8
LSM11P83369 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.63□□□□□ -0.239e-6■■■□□ 18.8
LSM11P83369 NR2C1-218ENST00000552861 2499 ntTSL 213.48□□□□□ -0.259e-6■■■□□ 18.8
LSM11P83369 GALT-211ENST00000489643 2019 ntTSL 213.13□□□□□ -0.319e-6■■■□□ 18.8
LSM11P83369 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.339e-6■■■□□ 18.8
LSM11P83369 GALT-228ENST00000557706 1828 ntTSL 312.95□□□□□ -0.349e-6■■■□□ 18.8
LSM11P83369 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.349e-6■■■□□ 18.8
LSM11P83369 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.53□□□□□ -0.49e-6■■■□□ 18.8
LSM11P83369 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.449e-6■■■□□ 18.8
LSM11P83369 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.449e-6■■■□□ 18.8
LSM11P83369 NR2C1-216ENST00000552484 465 ntTSL 412.25□□□□□ -0.459e-6■■■□□ 18.8
LSM11P83369 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC12.15□□□□□ -0.479e-6■■■□□ 18.8
LSM11P83369 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.479e-6■■■□□ 18.8
LSM11P83369 ZKSCAN1-204ENST00000482979 1449 ntTSL 1 (best)12.03□□□□□ -0.489e-6■■■□□ 18.8
LSM11P83369 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.519e-6■■■□□ 18.8
LSM11P83369 NR2C1-214ENST00000551647 740 ntTSL 511.56□□□□□ -0.569e-6■■■□□ 18.8
LSM11P83369 SH3YL1-211ENST00000460974 500 ntTSL 311.54□□□□□ -0.561e-10■■■□□ 18.8
LSM11P83369 GALT-215ENST00000554550 1164 ntTSL 211.52□□□□□ -0.579e-6■■■□□ 18.8
LSM11P83369 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.579e-6■■■□□ 18.8
LSM11P83369 PRDM16-207ENST00000512462 3723 ntTSL 1 (best)11.23□□□□□ -0.619e-6■■■□□ 18.8
LSM11P83369 GALT-216ENST00000554638 1712 ntTSL 511.18□□□□□ -0.629e-6■■■□□ 18.8
LSM11P83369 NR2C1-206ENST00000546416 864 ntTSL 311.18□□□□□ -0.629e-6■■■□□ 18.8
LSM11P83369 GALT-222ENST00000555754 727 ntTSL 310.74□□□□□ -0.699e-6■■■□□ 18.8
LSM11P83369 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC10.06□□□□□ -0.81e-10■■■□□ 18.8
LSM11P83369 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC9.95□□□□□ -0.829e-6■■■□□ 18.8
LSM11P83369 LRP5-205ENST00000529702 586 ntTSL 39.84□□□□□ -0.839e-6■■■□□ 18.8
LSM11P83369 FREM1-206ENST00000466679 741 ntTSL 39.84□□□□□ -0.839e-6■■■□□ 18.8
LSM11P83369 NR2C1-204ENST00000545833 1305 ntTSL 1 (best)9.54□□□□□ -0.889e-6■■■□□ 18.8
LSM11P83369 GALT-219ENST00000555020 2566 ntTSL 29.5□□□□□ -0.899e-6■■■□□ 18.8
LSM11P83369 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC9.47□□□□□ -0.899e-6■■■□□ 18.8
LSM11P83369 ABCC3-209ENST00000508929 575 ntTSL 28.93□□□□□ -0.989e-6■■■□□ 18.8
LSM11P83369 ZNF76-201ENST00000229405 4651 ntTSL 28.89□□□□□ -0.999e-6■■■□□ 18.8
LSM11P83369 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC8.88□□□□□ -0.991e-10■■■□□ 18.8
LSM11P83369 SH3YL1-219ENST00000473104 2463 ntTSL 1 (best)8.69□□□□□ -1.021e-10■■■□□ 18.8
LSM11P83369 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.029e-6■■■□□ 18.8
LSM11P83369 NR2C1-217ENST00000552791 591 ntTSL 38.55□□□□□ -1.049e-6■■■□□ 18.8
LSM11P83369 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.049e-6■■■□□ 18.8
LSM11P83369 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.079e-6■■■□□ 18.8
LSM11P83369 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.099e-6■■■□□ 18.8
LSM11P83369 FREM1-201ENST00000380875 6126 ntTSL 1 (best)8.16□□□□□ -1.19e-6■■■□□ 18.8
LSM11P83369 GALT-210ENST00000488412 858 ntTSL 27.95□□□□□ -1.149e-6■■■□□ 18.8
LSM11P83369 NPAS2-202ENST00000427413 625 ntTSL 37.6□□□□□ -1.193e-6■■■□□ 18.8
LSM11P83369 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.241e-7■■■□□ 18.8
LSM11P83369 FREM1-209ENST00000497634 701 ntTSL 37.27□□□□□ -1.259e-6■■■□□ 18.8
LSM11P83369 THOC1-216ENST00000584470 2255 ntTSL 26.94□□□□□ -1.31e-7■■■□□ 18.8
LSM11P83369 THOC1-208ENST00000580038 2033 ntTSL 56.26□□□□□ -1.411e-7■■■□□ 18.8
LSM11P83369 THOC1-206ENST00000579232 2277 ntTSL 55.83□□□□□ -1.481e-7■■■□□ 18.8
LSM11P83369 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.481e-7■■■□□ 18.8
LSM11P83369 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.77□□□□□ -1.491e-10■■■□□ 18.8
LSM11P83369 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.77□□□□□ -1.651e-7■■■□□ 18.8
LSM11P83369 THOC1-205ENST00000578529 2681 ntTSL 53.49□□□□□ -1.851e-7■■■□□ 18.8
LSM11P83369 THOC1-215ENST00000583228 2791 ntTSL 22.67□□□□□ -1.981e-7■■■□□ 18.8
LSM11P83369 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.46□□□□□ -0.097e-7■■■□□ 18.8
LSM11P83369 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.842e-6■■■□□ 18.8
LSM11P83369 TCF3-208ENST00000586318 631 ntTSL 314.97□□□□□ -0.012e-6■■■□□ 18.8
LSM11P83369 ACAD10-211ENST00000508303 2334 ntTSL 215.32■□□□□ 0.043e-6■■■□□ 18.8
LSM11P83369 ACAD10-214ENST00000512792 2618 ntTSL 313.81□□□□□ -0.23e-6■■■□□ 18.8
LSM11P83369 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.663e-6■■■□□ 18.8
LSM11P83369 ACAD10-203ENST00000455480 4071 ntTSL 1 (best) BASIC9.68□□□□□ -0.863e-6■■■□□ 18.8
LSM11P83369 ACAD10-201ENST00000313698 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.893e-6■■■□□ 18.8
LSM11P83369 SEMA4C-205ENST00000474420 2625 ntTSL 218.11■□□□□ 0.491e-7■■■□□ 18.7
LSM11P83369 SEMA4C-204ENST00000467747 3371 ntTSL 213.98□□□□□ -0.171e-7■■■□□ 18.7
LSM11P83369 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.441e-6■■■□□ 18.7
LSM11P83369 CHID1-216ENST00000529539 602 ntTSL 218.39■□□□□ 0.531e-6■■■□□ 18.7
LSM11P83369 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.29■□□□□ 0.361e-6■■■□□ 18.7
LSM11P83369 CHID1-223ENST00000534207 1171 ntTSL 516.03■□□□□ 0.161e-6■■■□□ 18.7
LSM11P83369 CHID1-213ENST00000528521 323 ntTSL 58.51□□□□□ -1.051e-6■■■□□ 18.7
LSM11P83369 FASN-211ENST00000637026 100 ntTSL 59.18□□□□□ -0.943e-7■■■□□ 18.7
LSM11P83369 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.912e-11■■■□□ 18.7
LSM11P83369 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)20.21■□□□□ 0.832e-11■■■□□ 18.7
LSM11P83369 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.19■□□□□ 0.822e-11■■■□□ 18.7
LSM11P83369 SNRNP70-209ENST00000601065 1757 ntTSL 320.02■□□□□ 0.82e-11■■■□□ 18.7
LSM11P83369 SNRNP70-202ENST00000401730 3144 ntTSL 216.3■□□□□ 0.22e-11■■■□□ 18.7
LSM11P83369 AC010522.1-201ENST00000597134 540 ntTSL 316.48■□□□□ 0.232e-6■■■□□ 18.7
LSM11P83369 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.132e-6■■■□□ 18.7
LSM11P83369 AC010522.1-202ENST00000593873 556 ntTSL 415.84■□□□□ 0.132e-6■■■□□ 18.7
LSM11P83369 AC010522.1-204ENST00000603271 580 ntTSL 215.84■□□□□ 0.132e-6■■■□□ 18.7
LSM11P83369 AC010522.1-203ENST00000596498 769 ntTSL 313.82□□□□□ -0.22e-6■■■□□ 18.7
LSM11P83369 AC010522.1-206ENST00000604231 576 ntTSL 410.57□□□□□ -0.722e-6■■■□□ 18.7
LSM11P83369 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.32□□□□□ -1.242e-6■■■□□ 18.7
LSM11P83369 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.192e-6■■■□□ 18.7
LSM11P83369 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.42■□□□□ 0.542e-6■■■□□ 18.7
LSM11P83369 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.112e-6■■■□□ 18.7
LSM11P83369 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.761e-7■■■□□ 18.7
LSM11P83369 SFXN3-204ENST00000466982 2756 ntTSL 210.41□□□□□ -0.742e-7■■■□□ 18.6
LSM11P83369 TWSG1-203ENST00000583147 2311 ntTSL 219.21■□□□□ 0.677e-8■■■□□ 18.6
Retrieved 100 of 11,495 protein–RNA pairs in 63.1 ms