RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
ZKSCAN1-204ENST00000482979 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
ZKSCAN1-204ENST00000482979 ABCC9O60706 1549 aa29.02■■■□□ 2.24
ZKSCAN1-204ENST00000482979 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
ZKSCAN1-204ENST00000482979 NACADO15069 1562 aa27.43■■□□□ 1.98
ZKSCAN1-204ENST00000482979 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
ZKSCAN1-204ENST00000482979 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
ZKSCAN1-204ENST00000482979 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
ZKSCAN1-204ENST00000482979 UNC13AQ9UPW8 1703 aa27.05■■□□□ 1.92
ZKSCAN1-204ENST00000482979 PABPN1Q86U42 306 aaKnown RBP eCLIP27.03■■□□□ 1.92
ZKSCAN1-204ENST00000482979 ZCCHC6Q5VYS8 1495 aaKnown RBP26.88■■□□□ 1.89
ZKSCAN1-204ENST00000482979 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
ZKSCAN1-204ENST00000482979 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
ZKSCAN1-204ENST00000482979 SCRIBQ14160 1630 aa26.49■■□□□ 1.83
ZKSCAN1-204ENST00000482979 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
ZKSCAN1-204ENST00000482979 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
ZKSCAN1-204ENST00000482979 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
ZKSCAN1-204ENST00000482979 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
ZKSCAN1-204ENST00000482979 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
ZKSCAN1-204ENST00000482979 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
ZKSCAN1-204ENST00000482979 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
ZKSCAN1-204ENST00000482979 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
ZKSCAN1-204ENST00000482979 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
ZKSCAN1-204ENST00000482979 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
ZKSCAN1-204ENST00000482979 PEG3Q9GZU2 1588 aa25.02■■□□□ 1.6
ZKSCAN1-204ENST00000482979 BAZ1BQ9UIG0 1483 aaKnown RBP25.01■■□□□ 1.59
ZKSCAN1-204ENST00000482979 ERCC6Q03468 1493 aa25■■□□□ 1.59
ZKSCAN1-204ENST00000482979 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
ZKSCAN1-204ENST00000482979 NESP48681 1621 aa24.97■■□□□ 1.59
ZKSCAN1-204ENST00000482979 CUX2O14529 1486 aa24.96■■□□□ 1.59
ZKSCAN1-204ENST00000482979 DNAJC5Q9H3Z4 198 aa24.9■■□□□ 1.58
ZKSCAN1-204ENST00000482979 LAMC3Q9Y6N6 1575 aa24.75■■□□□ 1.55
ZKSCAN1-204ENST00000482979 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
ZKSCAN1-204ENST00000482979 WIZO95785 1651 aa24.7■■□□□ 1.54
ZKSCAN1-204ENST00000482979 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.54
ZKSCAN1-204ENST00000482979 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.52
ZKSCAN1-204ENST00000482979 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
ZKSCAN1-204ENST00000482979 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
ZKSCAN1-204ENST00000482979 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
ZKSCAN1-204ENST00000482979 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
ZKSCAN1-204ENST00000482979 WDR62O43379 1518 aa24.36■■□□□ 1.49
ZKSCAN1-204ENST00000482979 CFTRP13569 1480 aa24.31■■□□□ 1.48
ZKSCAN1-204ENST00000482979 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
ZKSCAN1-204ENST00000482979 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
ZKSCAN1-204ENST00000482979 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
ZKSCAN1-204ENST00000482979 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
ZKSCAN1-204ENST00000482979 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
ZKSCAN1-204ENST00000482979 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
ZKSCAN1-204ENST00000482979 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
ZKSCAN1-204ENST00000482979 TRIM41Q8WV44 630 aa23.83■■□□□ 1.4
ZKSCAN1-204ENST00000482979 ZNF608Q9ULD9 1512 aaPredicted RBP23.83■■□□□ 1.4
ZKSCAN1-204ENST00000482979 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
ZKSCAN1-204ENST00000482979 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
ZKSCAN1-204ENST00000482979 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
ZKSCAN1-204ENST00000482979 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
ZKSCAN1-204ENST00000482979 EIF4G3O43432 1585 aaKnown RBP23.68■■□□□ 1.38
ZKSCAN1-204ENST00000482979 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
ZKSCAN1-204ENST00000482979 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
ZKSCAN1-204ENST00000482979 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.373e-6■□□□□ 8.3
ZKSCAN1-204ENST00000482979 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
ZKSCAN1-204ENST00000482979 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
ZKSCAN1-204ENST00000482979 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
ZKSCAN1-204ENST00000482979 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
ZKSCAN1-204ENST00000482979 CHD1O14646 1710 aa23.5■■□□□ 1.35
ZKSCAN1-204ENST00000482979 SOGA1O94964 1423 aa23.48■■□□□ 1.35
ZKSCAN1-204ENST00000482979 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
ZKSCAN1-204ENST00000482979 CUX1P39880 1505 aa23.47■■□□□ 1.35
ZKSCAN1-204ENST00000482979 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
ZKSCAN1-204ENST00000482979 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
ZKSCAN1-204ENST00000482979 FBLN2P98095 1184 aa23.38■■□□□ 1.33
ZKSCAN1-204ENST00000482979 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
ZKSCAN1-204ENST00000482979 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
ZKSCAN1-204ENST00000482979 GRIN2BQ13224 1484 aa23.27■■□□□ 1.32
ZKSCAN1-204ENST00000482979 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
ZKSCAN1-204ENST00000482979 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
ZKSCAN1-204ENST00000482979 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
ZKSCAN1-204ENST00000482979 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
ZKSCAN1-204ENST00000482979 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
ZKSCAN1-204ENST00000482979 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
ZKSCAN1-204ENST00000482979 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
ZKSCAN1-204ENST00000482979 SYNJ2O15056 1496 aa23.19■■□□□ 1.3
ZKSCAN1-204ENST00000482979 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
ZKSCAN1-204ENST00000482979 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
ZKSCAN1-204ENST00000482979 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
ZKSCAN1-204ENST00000482979 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
ZKSCAN1-204ENST00000482979 TOP2BQ02880 1626 aa23.09■■□□□ 1.29
ZKSCAN1-204ENST00000482979 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
ZKSCAN1-204ENST00000482979 ADAMTS12P58397 1594 aa23■■□□□ 1.27
ZKSCAN1-204ENST00000482979 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
ZKSCAN1-204ENST00000482979 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
ZKSCAN1-204ENST00000482979 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
ZKSCAN1-204ENST00000482979 NUP160Q12769 1436 aa22.92■■□□□ 1.26
ZKSCAN1-204ENST00000482979 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
ZKSCAN1-204ENST00000482979 FHAD1B1AJZ9 1412 aa22.9■■□□□ 1.26
ZKSCAN1-204ENST00000482979 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.25
ZKSCAN1-204ENST00000482979 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
ZKSCAN1-204ENST00000482979 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
ZKSCAN1-204ENST00000482979 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
ZKSCAN1-204ENST00000482979 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
ZKSCAN1-204ENST00000482979 IGF1RP08069 1367 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 286.7 ms