RNA–Protein interactions for RNA: ENST00000497634.2

FREM1-209, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 3

Gene FREM1, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-209ENST00000497634 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
FREM1-209ENST00000497634 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
FREM1-209ENST00000497634 PHF23Q9BUL5 403 aaPredicted RBP14.45□□□□□ -0.1
FREM1-209ENST00000497634 SENP3Q9H4L4 574 aaPredicted RBP14.34□□□□□ -0.11
FREM1-209ENST00000497634 FOXD1Q16676 465 aa13.42□□□□□ -0.26
FREM1-209ENST00000497634 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
FREM1-209ENST00000497634 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
FREM1-209ENST00000497634 ADRA2BP18089 450 aa12.73□□□□□ -0.37
FREM1-209ENST00000497634 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
FREM1-209ENST00000497634 MSH5O43196 834 aa12.35□□□□□ -0.43
FREM1-209ENST00000497634 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
FREM1-209ENST00000497634 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
FREM1-209ENST00000497634 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
FREM1-209ENST00000497634 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
FREM1-209ENST00000497634 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
FREM1-209ENST00000497634 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
FREM1-209ENST00000497634 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
FREM1-209ENST00000497634 KCNA4P22459 653 aa11.13□□□□□ -0.63
FREM1-209ENST00000497634 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
FREM1-209ENST00000497634 RNF216Q9NWF9 866 aaPredicted RBP11.12□□□□□ -0.63
FREM1-209ENST00000497634 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
FREM1-209ENST00000497634 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
FREM1-209ENST00000497634 DNAJC5BQ9UF47 199 aa10.84□□□□□ -0.67
FREM1-209ENST00000497634 RNF39Q9H2S5 420 aa10.64□□□□□ -0.71
FREM1-209ENST00000497634 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
FREM1-209ENST00000497634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.721e-23■□□□□ 10.9
FREM1-209ENST00000497634 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
FREM1-209ENST00000497634 U3KPZ7 1027 aaPredicted RBP10.46□□□□□ -0.73
FREM1-209ENST00000497634 C1QBPQ07021 282 aaKnown RBP10.44□□□□□ -0.74
FREM1-209ENST00000497634 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
FREM1-209ENST00000497634 ZBTB22O15209 634 aa10.31□□□□□ -0.76
FREM1-209ENST00000497634 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
FREM1-209ENST00000497634 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
FREM1-209ENST00000497634 MYCNP04198 464 aaPredicted RBP10.18□□□□□ -0.78
FREM1-209ENST00000497634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
FREM1-209ENST00000497634 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
FREM1-209ENST00000497634 SAMD1Q6SPF0 538 aaPredicted RBP10.1□□□□□ -0.79
FREM1-209ENST00000497634 CAPN15O75808 1086 aa10.08□□□□□ -0.8
FREM1-209ENST00000497634 DSG3P32926 999 aa10.05□□□□□ -0.8
FREM1-209ENST00000497634 ATF5Q9Y2D1 282 aaPredicted RBP10.05□□□□□ -0.8
FREM1-209ENST00000497634 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
FREM1-209ENST00000497634 APLP2Q06481 763 aa10.01□□□□□ -0.81
FREM1-209ENST00000497634 TRHP20396 242 aaPredicted RBP10□□□□□ -0.81
FREM1-209ENST00000497634 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
FREM1-209ENST00000497634 EHMT2Q96KQ7 1210 aa9.97□□□□□ -0.81
FREM1-209ENST00000497634 ABCB7O75027 752 aa9.93□□□□□ -0.82
FREM1-209ENST00000497634 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
FREM1-209ENST00000497634 POLA2Q14181 598 aa9.83□□□□□ -0.84
FREM1-209ENST00000497634 MKRN4PQ13434 485 aaPredicted RBP9.6□□□□□ -0.87
FREM1-209ENST00000497634 ZBTB12Q9Y330 459 aaPredicted RBP9.57□□□□□ -0.88
FREM1-209ENST00000497634 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
FREM1-209ENST00000497634 RBM42Q9BTD8 480 aaKnown RBP9.47□□□□□ -0.89
FREM1-209ENST00000497634 FBLN2P98095 1184 aa9.46□□□□□ -0.9
FREM1-209ENST00000497634 AKT1S1Q96B36 256 aa9.37□□□□□ -0.91
FREM1-209ENST00000497634 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
FREM1-209ENST00000497634 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
FREM1-209ENST00000497634 SPDYE2Q495Y8 402 aa9.36□□□□□ -0.91
FREM1-209ENST00000497634 SSUH2Q9Y2M2 353 aa9.33□□□□□ -0.92
FREM1-209ENST00000497634 REM2Q8IYK8 340 aaPredicted RBP9.31□□□□□ -0.92
FREM1-209ENST00000497634 ZNF692Q9BU19 519 aaPredicted RBP9.27□□□□□ -0.93
FREM1-209ENST00000497634 CHRDL2Q6WN34 429 aa9.23□□□□□ -0.93
FREM1-209ENST00000497634 PITPNM1O00562 1244 aa9.22□□□□□ -0.93
FREM1-209ENST00000497634 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
FREM1-209ENST00000497634 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
FREM1-209ENST00000497634 POTEHQ6S545 545 aa9.16□□□□□ -0.94
FREM1-209ENST00000497634 PROM2Q8N271 834 aa9.11□□□□□ -0.95
FREM1-209ENST00000497634 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
FREM1-209ENST00000497634 PIP4P2Q8N4L2 257 aa9.1□□□□□ -0.95
FREM1-209ENST00000497634 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
FREM1-209ENST00000497634 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
FREM1-209ENST00000497634 FKBP8Q14318 412 aa9□□□□□ -0.97
FREM1-209ENST00000497634 PRR29P0C7W0 189 aa8.95□□□□□ -0.98
FREM1-209ENST00000497634 PRKAR2AP13861 404 aaKnown RBP8.94□□□□□ -0.98
FREM1-209ENST00000497634 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
FREM1-209ENST00000497634 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
FREM1-209ENST00000497634 CREBZFQ9NS37 354 aa8.89□□□□□ -0.99
FREM1-209ENST00000497634 EVX2Q03828 476 aa8.84□□□□□ -0.99
FREM1-209ENST00000497634 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
FREM1-209ENST00000497634 FARP1Q9Y4F1 1045 aaPredicted RBP8.81□□□□□ -1
FREM1-209ENST00000497634 C19orf67A6NJJ6 358 aa8.79□□□□□ -1
FREM1-209ENST00000497634 HAX1O00165 279 aa8.77□□□□□ -1.01
FREM1-209ENST00000497634 SP7Q8TDD2 431 aaPredicted RBP8.72□□□□□ -1.01
FREM1-209ENST00000497634 MIER1Q8N108 512 aa8.68□□□□□ -1.02
FREM1-209ENST00000497634 CD44P16070 742 aaKnown RBP8.66□□□□□ -1.02
FREM1-209ENST00000497634 FBXO3Q9UK99 471 aa8.66□□□□□ -1.02
FREM1-209ENST00000497634 VASPP50552 380 aaPredicted RBP8.64□□□□□ -1.03
FREM1-209ENST00000497634 PLCD3Q8N3E9 789 aa8.62□□□□□ -1.03
FREM1-209ENST00000497634 NPM1P06748 294 aaKnown RBP eCLIP8.61□□□□□ -1.03
FREM1-209ENST00000497634 RASEFQ8IZ41 740 aa8.59□□□□□ -1.03
FREM1-209ENST00000497634 GABBR2O75899 941 aa8.58□□□□□ -1.04
FREM1-209ENST00000497634 NUBP1P53384 320 aa8.58□□□□□ -1.04
FREM1-209ENST00000497634 ZNF579Q8NAF0 562 aaKnown RBP8.58□□□□□ -1.04
FREM1-209ENST00000497634 ZRANB1Q9UGI0 708 aa8.58□□□□□ -1.04
FREM1-209ENST00000497634 PLEKHG5O94827 1062 aa8.55□□□□□ -1.04
FREM1-209ENST00000497634 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
FREM1-209ENST00000497634 PHF12Q96QT6 1004 aa8.54□□□□□ -1.04
FREM1-209ENST00000497634 CCDC61Q9Y6R9 512 aa8.53□□□□□ -1.04
FREM1-209ENST00000497634 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
FREM1-209ENST00000497634 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
FREM1-209ENST00000497634 GALR2O43603 387 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms