RNA–Protein interactions for RNA: ENST00000620510.1

ZKSCAN1-206, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 5 BASIC

Gene ZKSCAN1, Length 9,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-206ENST00000620510 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
ZKSCAN1-206ENST00000620510 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
ZKSCAN1-206ENST00000620510 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
ZKSCAN1-206ENST00000620510 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
ZKSCAN1-206ENST00000620510 APLP2Q06481 763 aa16.68■□□□□ 0.26
ZKSCAN1-206ENST00000620510 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
ZKSCAN1-206ENST00000620510 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
ZKSCAN1-206ENST00000620510 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
ZKSCAN1-206ENST00000620510 MYT1Q01538 1121 aa16.43■□□□□ 0.22
ZKSCAN1-206ENST00000620510 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
ZKSCAN1-206ENST00000620510 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.16
ZKSCAN1-206ENST00000620510 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
ZKSCAN1-206ENST00000620510 NEFLP07196 543 aa15.92■□□□□ 0.14
ZKSCAN1-206ENST00000620510 YTHDC1Q96MU7 727 aaKnown RBP15.89■□□□□ 0.13
ZKSCAN1-206ENST00000620510 TRIM41Q8WV44 630 aa15.78■□□□□ 0.12
ZKSCAN1-206ENST00000620510 PCGF6Q9BYE7 350 aa15.64■□□□□ 0.09
ZKSCAN1-206ENST00000620510 UBTFP17480 764 aaKnown RBP15.59■□□□□ 0.09
ZKSCAN1-206ENST00000620510 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
ZKSCAN1-206ENST00000620510 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
ZKSCAN1-206ENST00000620510 TRIM26Q12899 539 aaPredicted RBP15.46■□□□□ 0.07
ZKSCAN1-206ENST00000620510 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
ZKSCAN1-206ENST00000620510 CLSPNQ9HAW4 1339 aa15.14■□□□□ 0.01
ZKSCAN1-206ENST00000620510 TTBK1Q5TCY1 1321 aaPredicted RBP15.12■□□□□ 0.01
ZKSCAN1-206ENST00000620510 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
ZKSCAN1-206ENST00000620510 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
ZKSCAN1-206ENST00000620510 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
ZKSCAN1-206ENST00000620510 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
ZKSCAN1-206ENST00000620510 HRCP23327 699 aa15.05■□□□□ -0
ZKSCAN1-206ENST00000620510 ACIN1Q9UKV3 1341 aaKnown RBP14.98□□□□□ -0.01
ZKSCAN1-206ENST00000620510 MYT1LQ9UL68 1186 aa14.98□□□□□ -0.01
ZKSCAN1-206ENST00000620510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
ZKSCAN1-206ENST00000620510 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
ZKSCAN1-206ENST00000620510 NEFMP07197 916 aa14.94□□□□□ -0.02
ZKSCAN1-206ENST00000620510 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
ZKSCAN1-206ENST00000620510 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
ZKSCAN1-206ENST00000620510 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
ZKSCAN1-206ENST00000620510 ANP32CO43423 234 aa14.78□□□□□ -0.04
ZKSCAN1-206ENST00000620510 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
ZKSCAN1-206ENST00000620510 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
ZKSCAN1-206ENST00000620510 ITGAEP38570 1179 aa14.7□□□□□ -0.06
ZKSCAN1-206ENST00000620510 SLC4A1APQ9BWU0 796 aaKnown RBP14.67□□□□□ -0.06
ZKSCAN1-206ENST00000620510 ANP32BQ92688 251 aaKnown RBP14.66□□□□□ -0.06
ZKSCAN1-206ENST00000620510 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
ZKSCAN1-206ENST00000620510 EIF5BO60841 1220 aaKnown RBP14.62□□□□□ -0.07
ZKSCAN1-206ENST00000620510 ANP32AP39687 249 aaKnown RBP14.61□□□□□ -0.07
ZKSCAN1-206ENST00000620510 TRIM52Q96A61 297 aa14.59□□□□□ -0.07
ZKSCAN1-206ENST00000620510 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
ZKSCAN1-206ENST00000620510 CANXP27824 592 aaKnown RBP14.56□□□□□ -0.08
ZKSCAN1-206ENST00000620510 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
ZKSCAN1-206ENST00000620510 GLIPR1L2Q4G1C9 344 aa14.52□□□□□ -0.08
ZKSCAN1-206ENST00000620510 EEA1Q15075 1411 aa14.51□□□□□ -0.09
ZKSCAN1-206ENST00000620510 ABCC9O60706 1549 aa14.48□□□□□ -0.09
ZKSCAN1-206ENST00000620510 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
ZKSCAN1-206ENST00000620510 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.1
ZKSCAN1-206ENST00000620510 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
ZKSCAN1-206ENST00000620510 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.45□□□□□ -0.1
ZKSCAN1-206ENST00000620510 PPARGC1BQ86YN6 1023 aaKnown RBP14.44□□□□□ -0.1
ZKSCAN1-206ENST00000620510 TONSLQ96HA7 1378 aa14.43□□□□□ -0.1
ZKSCAN1-206ENST00000620510 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
ZKSCAN1-206ENST00000620510 ESF1Q9H501 851 aaKnown RBP14.4□□□□□ -0.1
ZKSCAN1-206ENST00000620510 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
ZKSCAN1-206ENST00000620510 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
ZKSCAN1-206ENST00000620510 NACADO15069 1562 aa14.38□□□□□ -0.11
ZKSCAN1-206ENST00000620510 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
ZKSCAN1-206ENST00000620510 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
ZKSCAN1-206ENST00000620510 NEUROD1Q13562 356 aa14.33□□□□□ -0.11
ZKSCAN1-206ENST00000620510 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
ZKSCAN1-206ENST00000620510 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.12
ZKSCAN1-206ENST00000620510 ZNF326Q5BKZ1 582 aaKnown RBP14.25□□□□□ -0.13
ZKSCAN1-206ENST00000620510 GTF3C3Q9Y5Q9 886 aa14.25□□□□□ -0.13
ZKSCAN1-206ENST00000620510 CDCA8Q53HL2 280 aa14.24□□□□□ -0.13
ZKSCAN1-206ENST00000620510 MYH16Q9H6N6 1097 aa14.24□□□□□ -0.13
ZKSCAN1-206ENST00000620510 CHMP4BQ9H444 224 aaKnown RBP14.22□□□□□ -0.13
ZKSCAN1-206ENST00000620510 BCANQ96GW7 911 aa14.21□□□□□ -0.13
ZKSCAN1-206ENST00000620510 BECN1Q14457 450 aa14.19□□□□□ -0.14
ZKSCAN1-206ENST00000620510 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
ZKSCAN1-206ENST00000620510 CDK11BP21127 795 aaKnown RBP14.17□□□□□ -0.14
ZKSCAN1-206ENST00000620510 FBLN2P98095 1184 aa14.17□□□□□ -0.14
ZKSCAN1-206ENST00000620510 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
ZKSCAN1-206ENST00000620510 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
ZKSCAN1-206ENST00000620510 CNGB1Q14028 1251 aaPredicted RBP14.16□□□□□ -0.14
ZKSCAN1-206ENST00000620510 STAG3Q9UJ98 1225 aa14.16□□□□□ -0.14
ZKSCAN1-206ENST00000620510 MTUS2Q5JR59 1369 aa14.15□□□□□ -0.14
ZKSCAN1-206ENST00000620510 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
ZKSCAN1-206ENST00000620510 GOLGA6L22H0YM25 854 aa14.14□□□□□ -0.15
ZKSCAN1-206ENST00000620510 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
ZKSCAN1-206ENST00000620510 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.153e-6■■■■■ 38.4
ZKSCAN1-206ENST00000620510 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
ZKSCAN1-206ENST00000620510 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
ZKSCAN1-206ENST00000620510 CLIP1P30622 1438 aa14.09□□□□□ -0.15
ZKSCAN1-206ENST00000620510 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
ZKSCAN1-206ENST00000620510 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.16
ZKSCAN1-206ENST00000620510 MS4A1P11836 297 aa14.08□□□□□ -0.16
ZKSCAN1-206ENST00000620510 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
ZKSCAN1-206ENST00000620510 NCLP19338 710 aaKnown RBP14.07□□□□□ -0.16
ZKSCAN1-206ENST00000620510 CASC1Q6TDU7 716 aa14.07□□□□□ -0.16
ZKSCAN1-206ENST00000620510 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
ZKSCAN1-206ENST00000620510 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
ZKSCAN1-206ENST00000620510 ARID4BQ4LE39 1312 aaPredicted RBP14.06□□□□□ -0.16
ZKSCAN1-206ENST00000620510 TNNT2P45379 298 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms