RNA–Protein interactions for RNA: ENST00000528521.1

CHID1-213, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-213ENST00000528521 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
CHID1-213ENST00000528521 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
CHID1-213ENST00000528521 ABCC9O60706 1549 aa21.17■□□□□ 0.98
CHID1-213ENST00000528521 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
CHID1-213ENST00000528521 NACADO15069 1562 aa20.32■□□□□ 0.84
CHID1-213ENST00000528521 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
CHID1-213ENST00000528521 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
CHID1-213ENST00000528521 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
CHID1-213ENST00000528521 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
CHID1-213ENST00000528521 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
CHID1-213ENST00000528521 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
CHID1-213ENST00000528521 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
CHID1-213ENST00000528521 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
CHID1-213ENST00000528521 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
CHID1-213ENST00000528521 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
CHID1-213ENST00000528521 EIF4G1Q04637 1599 aaKnown RBP19.26■□□□□ 0.67
CHID1-213ENST00000528521 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
CHID1-213ENST00000528521 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
CHID1-213ENST00000528521 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
CHID1-213ENST00000528521 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
CHID1-213ENST00000528521 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
CHID1-213ENST00000528521 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
CHID1-213ENST00000528521 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
CHID1-213ENST00000528521 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
CHID1-213ENST00000528521 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
CHID1-213ENST00000528521 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
CHID1-213ENST00000528521 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
CHID1-213ENST00000528521 WIZO95785 1651 aa18.47■□□□□ 0.55
CHID1-213ENST00000528521 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
CHID1-213ENST00000528521 NESP48681 1621 aa18.31■□□□□ 0.52
CHID1-213ENST00000528521 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
CHID1-213ENST00000528521 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.51
CHID1-213ENST00000528521 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
CHID1-213ENST00000528521 DNAJC5Q9H3Z4 198 aa18.18■□□□□ 0.5
CHID1-213ENST00000528521 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
CHID1-213ENST00000528521 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
CHID1-213ENST00000528521 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
CHID1-213ENST00000528521 CUX2O14529 1486 aa18.14■□□□□ 0.49
CHID1-213ENST00000528521 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
CHID1-213ENST00000528521 CFTRP13569 1480 aa18.06■□□□□ 0.48
CHID1-213ENST00000528521 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
CHID1-213ENST00000528521 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
CHID1-213ENST00000528521 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
CHID1-213ENST00000528521 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
CHID1-213ENST00000528521 WDR62O43379 1518 aa17.95■□□□□ 0.46
CHID1-213ENST00000528521 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
CHID1-213ENST00000528521 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
CHID1-213ENST00000528521 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
CHID1-213ENST00000528521 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
CHID1-213ENST00000528521 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
CHID1-213ENST00000528521 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
CHID1-213ENST00000528521 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
CHID1-213ENST00000528521 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
CHID1-213ENST00000528521 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
CHID1-213ENST00000528521 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
CHID1-213ENST00000528521 CUX1P39880 1505 aa17.52■□□□□ 0.39
CHID1-213ENST00000528521 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
CHID1-213ENST00000528521 FGD5Q6ZNL6 1462 aa17.45■□□□□ 0.38
CHID1-213ENST00000528521 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
CHID1-213ENST00000528521 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
CHID1-213ENST00000528521 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
CHID1-213ENST00000528521 SOGA1O94964 1423 aa17.38■□□□□ 0.37
CHID1-213ENST00000528521 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHID1-213ENST00000528521 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
CHID1-213ENST00000528521 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
CHID1-213ENST00000528521 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
CHID1-213ENST00000528521 CHD1O14646 1710 aa17.3■□□□□ 0.36
CHID1-213ENST00000528521 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
CHID1-213ENST00000528521 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
CHID1-213ENST00000528521 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
CHID1-213ENST00000528521 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
CHID1-213ENST00000528521 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
CHID1-213ENST00000528521 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
CHID1-213ENST00000528521 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
CHID1-213ENST00000528521 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
CHID1-213ENST00000528521 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
CHID1-213ENST00000528521 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
CHID1-213ENST00000528521 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
CHID1-213ENST00000528521 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
CHID1-213ENST00000528521 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
CHID1-213ENST00000528521 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
CHID1-213ENST00000528521 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
CHID1-213ENST00000528521 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
CHID1-213ENST00000528521 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
CHID1-213ENST00000528521 FBLN2P98095 1184 aa17.05■□□□□ 0.32
CHID1-213ENST00000528521 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
CHID1-213ENST00000528521 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
CHID1-213ENST00000528521 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
CHID1-213ENST00000528521 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
CHID1-213ENST00000528521 NUP160Q12769 1436 aa16.98■□□□□ 0.31
CHID1-213ENST00000528521 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
CHID1-213ENST00000528521 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
CHID1-213ENST00000528521 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
CHID1-213ENST00000528521 CUL7Q14999 1698 aa16.92■□□□□ 0.3
CHID1-213ENST00000528521 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
CHID1-213ENST00000528521 IGF1RP08069 1367 aa16.89■□□□□ 0.3
CHID1-213ENST00000528521 RUSC2Q8N2Y8 1516 aa16.87■□□□□ 0.29
CHID1-213ENST00000528521 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
CHID1-213ENST00000528521 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
CHID1-213ENST00000528521 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms