Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RPS28P62857 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.68□□□□□ -0.38
RPS28P62857 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RPS28P62857 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC12.68□□□□□ -0.38
RPS28P62857 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.68□□□□□ -0.38
RPS28P62857 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RPS28P62857 AP000974.1-201ENST00000623909 2387 ntBASIC12.68□□□□□ -0.38
RPS28P62857 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RPS28P62857 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC12.68□□□□□ -0.38
RPS28P62857 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPS28P62857 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.67□□□□□ -0.38
RPS28P62857 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPS28P62857 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RPS28P62857 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RPS28P62857 AC138932.1-201ENST00000534164 6830 ntBASIC12.67□□□□□ -0.38
RPS28P62857 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPS28P62857 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPS28P62857 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.67□□□□□ -0.38
RPS28P62857 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPS28P62857 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPS28P62857 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPS28P62857 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.67□□□□□ -0.38
RPS28P62857 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPS28P62857 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC12.67□□□□□ -0.38
RPS28P62857 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC12.67□□□□□ -0.38
RPS28P62857 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RPS28P62857 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.67□□□□□ -0.38
RPS28P62857 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
RPS28P62857 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
RPS28P62857 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RPS28P62857 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RPS28P62857 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.66□□□□□ -0.38
RPS28P62857 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RPS28P62857 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.66□□□□□ -0.38
RPS28P62857 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.66□□□□□ -0.38
RPS28P62857 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.66□□□□□ -0.38
RPS28P62857 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 AC018358.1-201ENST00000631079 1402 ntBASIC12.66□□□□□ -0.38
RPS28P62857 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 FAM99A-202ENST00000538190 1989 ntBASIC12.66□□□□□ -0.38
RPS28P62857 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.66□□□□□ -0.38
RPS28P62857 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.66□□□□□ -0.38
RPS28P62857 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC12.66□□□□□ -0.38
RPS28P62857 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.66□□□□□ -0.38
RPS28P62857 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RPS28P62857 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.65□□□□□ -0.38
RPS28P62857 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.65□□□□□ -0.38
RPS28P62857 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.65□□□□□ -0.38
RPS28P62857 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC12.65□□□□□ -0.38
RPS28P62857 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
RPS28P62857 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RPS28P62857 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RPS28P62857 PCDHB18P-201ENST00000524813 2368 ntBASIC12.65□□□□□ -0.38
RPS28P62857 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC12.65□□□□□ -0.38
RPS28P62857 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC12.65□□□□□ -0.38
RPS28P62857 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RPS28P62857 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
RPS28P62857 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
RPS28P62857 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RPS28P62857 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPS28P62857 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RPS28P62857 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RPS28P62857 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.64□□□□□ -0.39
RPS28P62857 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms